Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NPIPA1Q9UND3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
NPIPA1Q9UND3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NPIPA1Q9UND3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA1Q9UND3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA1Q9UND3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
NPIPA1Q9UND3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA1Q9UND3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA1Q9UND3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC004158.1-201ENST00000564508 4319 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC079809.1-201ENST00000415468 276 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AL121878.1-201ENST00000418638 859 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC017019.1-201ENST00000426129 261 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 PA2G4P6-201ENST00000438325 1197 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 SUMO2P1-206ENST00000445436 284 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 DNAJB5P1-201ENST00000454004 806 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC110775.1-201ENST00000513721 462 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AP001922.4-201ENST00000526967 290 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AL049874.4-201ENST00000557593 255 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC005252.1-201ENST00000604518 1063 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC009597.2-201ENST00000604659 592 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 MIR6748-201ENST00000610433 71 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AP003400.3-201ENST00000624904 346 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AL353662.3-201ENST00000625131 237 ntBASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NPIPA1Q9UND3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 PCAT14-202ENST00000627127 3935 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RN7SKP153-201ENST00000365026 316 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 OR1L6-202ENST00000373684 1044 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RNU6-1320P-201ENST00000390838 107 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 SNORA48.4-201ENST00000391089 134 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RNU6-1269P-201ENST00000391139 107 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 CHMP1B2P-201ENST00000399581 597 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RBMY2KP-201ENST00000418221 992 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC006466.1-201ENST00000438721 289 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RNU6-599P-201ENST00000459383 107 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RNU6-1193P-201ENST00000459461 107 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC093827.1-201ENST00000480094 861 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RN7SL423P-201ENST00000486202 304 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC004980.4-201ENST00000513375 203 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC022360.1-201ENST00000521058 340 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms