Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 AP003119.3-201ENST00000566747 4192 ntBASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.18□□□□□ -1.26
CUEDC1Q9NWM3 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 CCT8P1-201ENST00000413611 1657 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 OR51A10P-201ENST00000307165 937 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP184-201ENST00000362348 333 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC099535.1-201ENST00000408928 371 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 RPS3AP3-201ENST00000411933 242 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC013404.1-201ENST00000413068 249 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AL353193.1-201ENST00000421444 268 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 EIF1P3-201ENST00000423841 334 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 FDPSP1-201ENST00000424976 1071 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 LIN28AP2-201ENST00000445283 458 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AL139156.3-201ENST00000454802 394 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC021660.1-201ENST00000465006 554 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC139783.2-201ENST00000504847 1145 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC008496.1-201ENST00000509131 295 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 LINC01085-203ENST00000511195 326 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC022296.2-201ENST00000512424 202 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC017037.2-201ENST00000513850 890 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP116-201ENST00000516902 319 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AP003122.4-201ENST00000530980 758 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC027026.1-201ENST00000532323 742 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AL390334.1-201ENST00000556395 450 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC007621.1-201ENST00000604544 437 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 RPS28P1-201ENST00000604589 187 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 CUX2P1-201ENST00000606426 298 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 FAM27E3-202ENST00000614611 340 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC183089.2-201ENST00000637931 916 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 COL6A4P1-202ENST00000487147 4317 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 AC093297.3-201ENST00000607056 2517 ntBASIC7.17□□□□□ -1.26
CUEDC1Q9NWM3 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CUEDC1Q9NWM3 RNY3P3-201ENST00000363816 102 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms