Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL450322.1-201ENST00000415358 313 ntTSL 3 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 RPL17P17-201ENST00000419491 557 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 BRWD1P3-201ENST00000428816 390 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 RPSAP62-201ENST00000432596 833 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC004006.1-201ENST00000434994 377 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 TIMM9P1-201ENST00000436122 256 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 RPL12P46-201ENST00000436610 195 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 Z95327.1-201ENST00000446082 482 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC104651.2-201ENST00000447549 528 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 POLR2CP1-201ENST00000453699 765 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 SNORD121B-201ENST00000458838 81 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 SLC25A51P1-201ENST00000468432 871 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 RN7SL211P-201ENST00000485246 276 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 RPL39P36-201ENST00000490784 156 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 RN7SL864P-201ENST00000493457 285 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 LINC02548-201ENST00000531749 484 ntTSL 3 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 ARGFXP2-201ENST00000579304 949 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 RN7SL14P-201ENST00000579715 298 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 COX6CP3-201ENST00000580869 223 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 PDLIM1P3-201ENST00000582370 599 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC104794.4-201ENST00000607181 446 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 Metazoa_SRP.155-201ENST00000616367 282 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC009233.1-201ENST00000616477 371 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC119619.1-201ENST00000619728 112 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC012629.4-201ENST00000623327 259 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC091953.4-201ENST00000625179 341 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 IPO4-221ENST00000625289 297 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 PKP4-218ENST00000629219 162 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AL590396.3-201ENST00000636334 300 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AL672167.1-205ENST00000641112 3080 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC007406.5-201ENST00000570140 3170 ntBASIC9.34□□□□□ -0.91
RTN4Q9NQC3 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RTN4Q9NQC3 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC105046.1-201ENST00000566457 4997 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 RNU6-1158P-201ENST00000391167 107 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 MIR1250-201ENST00000408098 113 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC099535.1-201ENST00000408928 371 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 REREP1Y-201ENST00000422655 198 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 OR4F13P-201ENST00000428478 931 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 REREP2Y-201ENST00000439103 200 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 RPL12P44-201ENST00000442319 502 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AC023274.2-201ENST00000445264 521 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 RN7SL724P-201ENST00000461895 271 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 RN7SL420P-201ENST00000463843 298 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 RN7SL757P-201ENST00000466709 301 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 HMGB1P21-201ENST00000502313 581 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 GAPDHP56-201ENST00000506031 988 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 FTH1P21-201ENST00000512179 511 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 MTND6P2-201ENST00000512226 524 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 MSRA-205ENST00000518255 674 ntTSL 5 BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RTN4Q9NQC3 AP001767.1-201ENST00000530976 286 ntBASIC9.33□□□□□ -0.92
RTN4Q9NQC3 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms