Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC233289.1-201ENST00000403700 508 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC211486.3-201ENST00000412694 621 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC013429.2-201ENST00000418798 781 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 RPL35AP21-201ENST00000437667 333 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 GTF3AP5-201ENST00000442645 697 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 RPL7AP61-201ENST00000443410 636 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 NPM1P39-201ENST00000449818 867 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC009127.1-201ENST00000467090 155 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 RPS4XP1-201ENST00000482189 787 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC024558.1-201ENST00000505008 528 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 OR4A46P-201ENST00000527255 933 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AL512310.9-201ENST00000553311 948 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AC087821.1-201ENST00000623639 567 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 TCP1P3-201ENST00000414406 1498 ntBASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.17□□□□□ -1.58
LRRC40Q9H9A6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 RNA5SP435-201ENST00000364044 108 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 RNU1-43P-201ENST00000365052 165 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC013470.3-201ENST00000420252 1194 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 HSPE1P16-201ENST00000426640 348 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 OR52B5P-201ENST00000435337 951 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC012512.1-201ENST00000446594 718 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AL133244.1-201ENST00000456007 258 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC073073.1-201ENST00000493920 463 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC106872.4-201ENST00000510050 523 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 ATP5LP3-201ENST00000514223 304 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AP006245.2-201ENST00000522004 300 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AL512329.2-201ENST00000607350 548 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AC008115.4-201ENST00000619780 775 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 AP001005.3-201ENST00000622049 129 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 OR52B5P-202ENST00000641118 1110 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.16□□□□□ -1.58
LRRC40Q9H9A6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 VPS35P1-201ENST00000563400 1518 ntBASIC5.15□□□□□ -1.58
LRRC40Q9H9A6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms