Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCSER1Q9C0I3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 MTND5P23-201ENST00000430812 1655 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AC013429.2-201ENST00000418798 781 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 UBE2V2P1-201ENST00000434717 398 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 OR7E125P-201ENST00000443450 846 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 HMGN2P25-201ENST00000486956 268 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AC051619.2-201ENST00000559063 397 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AC211433.2-201ENST00000608433 387 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 OR51C1P-201ENST00000608504 942 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AL627230.1-201ENST00000613077 211 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 MIR7155-201ENST00000615925 56 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AL591926.8-201ENST00000616876 211 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 LINC01739-205ENST00000641890 573 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 TCP11X1-202ENST00000622971 1372 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 AC068446.1-201ENST00000556425 1549 ntBASIC5.64□□□□□ -1.51
CCSER1Q9C0I3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AC007996.1-201ENST00000620414 2821 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 RPL23P2-201ENST00000320371 421 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 RNA5SP507-201ENST00000363603 121 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 RNU1-106P-201ENST00000384382 164 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 QRSL1P2-201ENST00000418582 964 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 PTP4A1P1-201ENST00000420539 515 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 SNRPFP2-201ENST00000440710 251 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 NDUFA5P8-201ENST00000449019 346 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AC090114.3-201ENST00000479267 829 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 COX6B1P5-201ENST00000509843 249 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 RNA5SP43-201ENST00000516559 110 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 OR7E128P-201ENST00000532736 1024 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 HMGN2P6-201ENST00000551091 273 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 NMNAT1P1-201ENST00000554095 876 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AP005212.4-201ENST00000614206 710 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 AC037198.3-201ENST00000616754 526 ntBASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.63□□□□□ -1.51
CCSER1Q9C0I3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 RNU6-249P-201ENST00000363016 102 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms