Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ATP5LP5-201ENST00000483050 299 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 RPS21P4-201ENST00000487122 248 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 RN7SL205P-201ENST00000490174 284 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC022832.1-201ENST00000530718 645 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC137768.1-201ENST00000549998 553 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 RN7SL52P-201ENST00000584271 284 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC009163.6-201ENST00000612367 342 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC090607.5-201ENST00000615692 224 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 RN7SL722P-201ENST00000617780 284 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 RN7SL565P-201ENST00000618246 284 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 OR52B5P-202ENST00000641118 1110 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM4Q9C037 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM4Q9C037 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM4Q9C037 AC079097.1-201ENST00000512187 1399 ntBASIC5.26□□□□□ -1.57
TRIM4Q9C037 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM4Q9C037 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRIM4Q9C037 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM4Q9C037 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM4Q9C037 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM4Q9C037 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC013442.1-201ENST00000397347 228 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 SSR1P1-201ENST00000407630 814 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 RPL6P21-201ENST00000418672 846 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC006335.2-201ENST00000437993 330 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 RPL7L1P1-201ENST00000448259 785 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 ARL4AP1-201ENST00000503220 705 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC091912.1-201ENST00000511351 248 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 RAB9BP1-201ENST00000519581 626 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC079064.1-201ENST00000528365 362 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 OR5AM1P-201ENST00000532136 1032 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC025574.2-201ENST00000615621 514 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC074140.1-201ENST00000621617 208 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 SAMMSON-209ENST00000641222 1100 ntBASIC5.25□□□□□ -1.57
TRIM4Q9C037 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM4Q9C037 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
TRIM4Q9C037 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM4Q9C037 AP001273.1-201ENST00000624493 3152 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 AL359715.3-201ENST00000569267 2123 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 RNA5SP131-201ENST00000365452 119 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 GABARAPL3-201ENST00000412799 354 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 COX6CP17-201ENST00000421389 185 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 RPL36AP10-201ENST00000421785 322 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC073587.1-201ENST00000447093 876 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 RPS26P41-201ENST00000450370 284 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC100784.1-201ENST00000522790 310 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms