Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 Y_RNA.18-201ENST00000362461 102 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 RPL10P10-201ENST00000403509 664 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL133260.1-201ENST00000405720 405 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 RPL12P23-201ENST00000405880 490 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC002524.1-201ENST00000411687 547 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 TPT1P2-201ENST00000413105 503 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 RPS7P13-201ENST00000413955 498 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC009237.5-201ENST00000414271 501 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL139413.1-201ENST00000421309 217 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 COL11A2P1-205ENST00000441798 676 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC011742.2-201ENST00000443818 352 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 NFU1P2-201ENST00000448700 469 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 FAR2P1-206ENST00000449736 709 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 TVP23CP1-201ENST00000450317 639 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 OR9M1P-201ENST00000459641 921 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC092989.1-201ENST00000481235 277 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC092718.4-201ENST00000566639 716 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AP003115.1-201ENST00000569849 463 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC010547.7-201ENST00000570323 333 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 SYPL1P2-201ENST00000582878 727 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL117336.2-201ENST00000602435 335 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL049840.5-201ENST00000602827 552 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC010680.3-201ENST00000604215 520 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 NDUFB9P1-201ENST00000604683 510 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC114477.1-201ENST00000605097 605 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 SNORD96A-201ENST00000606577 79 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC099676.1-201ENST00000608886 657 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC068726.1-201ENST00000610993 341 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC004241.2-201ENST00000614562 444 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL136221.1-201ENST00000621449 509 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 MFSD8-245ENST00000641743 948 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AL136531.3-201ENST00000624378 3658 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 NCOA4P2-201ENST00000340589 1813 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 MTND5P26-201ENST00000426018 1752 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 AC009135.2-201ENST00000624136 1768 ntBASIC5.5□□□□□ -1.53
SSBP3Q9BWW4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSBP3Q9BWW4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms