Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC002381.1-201ENST00000447049 280 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 FTH1P27-201ENST00000449509 551 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 RBMY2EP-202ENST00000456360 940 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 RPL23AP71-201ENST00000470966 469 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC009022.1-201ENST00000472115 496 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 RPS3P7-201ENST00000488662 726 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AL031073.1-201ENST00000503029 1139 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 SUMO2P4-201ENST00000504193 276 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC004062.1-201ENST00000509926 645 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 RNA5SP92-201ENST00000516437 110 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC009812.2-201ENST00000517657 457 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC084251.1-201ENST00000521867 382 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 COX6B1P6-201ENST00000522347 255 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 OR4C7P-201ENST00000533375 919 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC025252.2-201ENST00000537470 502 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 HAUS8P1-201ENST00000549005 542 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC093826.2-201ENST00000579042 108 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 MIR3187-201ENST00000583431 70 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC087645.1-201ENST00000588528 291 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 OR1X1P-201ENST00000606159 931 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC006238.1-201ENST00000609787 534 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AL121782.1-201ENST00000611242 413 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 KDM5DP1-201ENST00000622542 298 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC024580.1-201ENST00000623020 674 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 AC073488.5-201ENST00000631993 754 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 AL161912.4-201ENST00000623889 2468 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USB1Q9BQ65 SSXP3-201ENST00000442971 1300 ntBASIC7.23□□□□□ -1.25
USB1Q9BQ65 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
USB1Q9BQ65 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 CDY4P-201ENST00000418290 1513 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 IMMTP1-201ENST00000435590 2219 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 RNU6-1188P-201ENST00000363795 107 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 RNU6-853P-201ENST00000364306 107 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 RNU6-744P-201ENST00000365557 107 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 RNU4-48P-201ENST00000365559 182 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 RNU6-209P-201ENST00000384118 107 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 RNU6-1316P-201ENST00000384242 108 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 Y_RNA.527-201ENST00000384573 102 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 RN7SKP127-201ENST00000410443 354 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 MCFD2P1-201ENST00000417812 300 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 RPS15AP12-201ENST00000419498 388 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC098828.1-201ENST00000436164 440 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 TUBB4BP6-201ENST00000437576 479 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC018738.1-201ENST00000441378 210 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC107983.1-201ENST00000442562 210 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 RN7SL464P-201ENST00000492743 297 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 RNU6-273P-201ENST00000516937 96 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms