Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX3Q99909 AC005229.2-201ENST00000456995 399 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 RN7SL717P-201ENST00000478343 297 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 ENPP7P11-201ENST00000505915 627 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX3Q99909 SCARNA6.1-201ENST00000516989 238 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 IGLV3-24-201ENST00000517477 197 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.68□□□□□ -1.66
SSX3Q99909 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX3Q99909 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX3Q99909 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX3Q99909 AC010547.6-201ENST00000571789 193 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX3Q99909 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX3Q99909 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX3Q99909 AC135803.1-201ENST00000608748 565 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 AC016957.2-201ENST00000616998 848 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX3Q99909 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX3Q99909 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SSX3Q99909 AL359715.4-201ENST00000606629 1436 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 AL034370.1-201ENST00000397254 1590 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 AC104118.1-201ENST00000607625 1589 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX3Q99909 AC011755.1-201ENST00000623763 2049 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 AP004607.3-201ENST00000530354 3915 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
SSX3Q99909 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SSX3Q99909 AC130304.1-201ENST00000622942 2385 ntBASIC4.68□□□□□ -1.66
SSX3Q99909 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSX3Q99909 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX3Q99909 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 AC010329.2-201ENST00000595195 2737 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AC005332.5-201ENST00000591222 2919 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SSX3Q99909 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.67□□□□□ -1.66
SSX3Q99909 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SSX3Q99909 RNA5SP394-201ENST00000364216 119 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 EIF4A1P3-201ENST00000411521 244 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX3Q99909 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX3Q99909 CHEK2P5-201ENST00000423877 246 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AC127526.2-201ENST00000426436 775 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AL022331.1-201ENST00000429025 477 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 RPS23P9-201ENST00000448848 438 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX3Q99909 RN7SL273P-201ENST00000481561 299 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 RPL38P3-201ENST00000484463 213 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 NIP7P2-201ENST00000485801 544 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX3Q99909 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX3Q99909 COL6A4P2-205ENST00000509855 506 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX3Q99909 IGLV3-30-201ENST00000524362 298 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AC027544.3-201ENST00000535082 757 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX3Q99909 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 IGBP1P1-201ENST00000554337 1009 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX3Q99909 AC090515.3-201ENST00000560431 315 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX3Q99909 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX3Q99909 AL008729.2-201ENST00000606393 473 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX3Q99909 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SSX3Q99909 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 ASNSP1-201ENST00000518311 1939 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SSX3Q99909 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SSX3Q99909 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 OR13C1P-202ENST00000641378 2919 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
SSX3Q99909 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
SSX3Q99909 AC235565.1-201ENST00000456962 1325 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AC090971.4-201ENST00000560291 1800 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 AL360270.2-201ENST00000562952 5985 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms