Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CALM1P2-201ENST00000452941 448 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 HSPE1P22-201ENST00000456856 327 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 CDH12P2-201ENST00000504393 298 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC109635.6-201ENST00000525487 1113 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC006518.2-201ENST00000542513 940 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 DPPA2P4-201ENST00000563717 878 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC063977.5-201ENST00000601044 974 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AL035411.2-201ENST00000604022 421 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AL121890.3-201ENST00000618494 516 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC010975.3-201ENST00000618727 978 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AL390318.1-201ENST00000624564 687 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AL359955.1-201ENST00000455242 3275 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC017007.4-201ENST00000503353 1352 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 OR52B3P-201ENST00000314715 928 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RNA5SP122-201ENST00000384457 108 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RPL23AP59-201ENST00000399415 461 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 FCF1P5-201ENST00000406490 482 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC245060.4-201ENST00000413293 1121 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 HMGB3P31-201ENST00000413333 595 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 LINC01347-201ENST00000417964 355 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 GTF2IP2-201ENST00000424290 697 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC127526.2-201ENST00000426436 775 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC242426.1-201ENST00000435270 960 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RPS6P2-201ENST00000454208 705 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RPS23P2-201ENST00000463671 415 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC007998.1-201ENST00000474156 672 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RPS7P6-201ENST00000485777 579 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RPL32P33-201ENST00000487023 394 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 SNORA70.20-201ENST00000516848 126 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC007834.2-201ENST00000536310 343 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AL109741.3-201ENST00000561748 592 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AGGF1P6-201ENST00000569213 976 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC107952.2-201ENST00000606048 486 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RN7SL544P-201ENST00000617232 284 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC241377.1-201ENST00000619797 406 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 RN7SL763P-201ENST00000620922 284 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AP003399.1-201ENST00000637534 361 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 AC232271.1-201ENST00000602455 2715 ntBASIC5.34□□□□□ -1.55
CTHRC1Q96CG8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.34□□□□□ -1.56
CTHRC1Q96CG8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 AC007842.1-201ENST00000597336 2039 ntBASIC5.33□□□□□ -1.56
CTHRC1Q96CG8 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms