Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 EIF2S2P4-201ENST00000461070 984 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC092905.1-201ENST00000467527 949 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 HMGB1P44-201ENST00000508597 572 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 MTND6P2-201ENST00000512226 524 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC122688.1-201ENST00000541494 223 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 MIR4646-201ENST00000580775 63 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 RN7SL708P-201ENST00000580952 299 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC009237.13-201ENST00000603193 276 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 AL139022.2-201ENST00000606934 443 ntBASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.06□□□□□ -1.6
TM9SF4Q92544 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TM9SF4Q92544 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC003985.2-201ENST00000562268 1669 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 SCARNA15-201ENST00000607520 4325 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC092681.1-201ENST00000297369 291 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 RPL23P2-201ENST00000320371 421 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 RNA5SP443-201ENST00000363083 132 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 MIR550A3-201ENST00000390735 95 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 RPL12P43-201ENST00000420608 499 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 MTND4LP14-201ENST00000429447 288 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC245047.2-201ENST00000441060 530 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 RPS26P41-201ENST00000450370 284 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC104629.1-201ENST00000494226 508 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 SNRPCP2-201ENST00000504370 475 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 IGLV3-24-201ENST00000517477 197 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC079064.1-201ENST00000528365 362 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC005341.1-201ENST00000571086 708 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC005776.1-201ENST00000603164 290 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 OR8G7P-201ENST00000616658 848 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC097372.4-201ENST00000625025 466 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 FRG1EP-201ENST00000634469 770 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AL513548.1-201ENST00000562904 1724 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 CDC27P2-201ENST00000425026 1922 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TM9SF4Q92544 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TM9SF4Q92544 AC011493.1-201ENST00000596753 1632 ntBASIC5.05□□□□□ -1.6
TM9SF4Q92544 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms