Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 TCEA1P3-201ENST00000443005 880 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 AC008147.3-201ENST00000548666 354 ntBASIC7.51□□□□□ -1.21
VPS8Q8N3P4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
VPS8Q8N3P4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AC093671.1-201ENST00000624981 2929 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AC005831.1-201ENST00000624384 1697 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AC092570.3-201ENST00000420113 693 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AC025164.1-201ENST00000496249 478 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AL359219.2-201ENST00000555184 348 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AC012414.7-202ENST00000622705 1090 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 AP000346.3-201ENST00000622821 210 ntBASIC7.5□□□□□ -1.21
VPS8Q8N3P4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VPS8Q8N3P4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 AL807761.1-201ENST00000417622 171 ntBASIC7.49□□□□□ -1.21
VPS8Q8N3P4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 RPL5P12-201ENST00000477071 851 ntBASIC7.49□□□□□ -1.21
VPS8Q8N3P4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.49□□□□□ -1.21
VPS8Q8N3P4 AC087283.1-201ENST00000604029 1074 ntBASIC7.49□□□□□ -1.21
VPS8Q8N3P4 AP000473.2-201ENST00000602659 1537 ntBASIC7.49□□□□□ -1.21
VPS8Q8N3P4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AL590762.2-201ENST00000395798 571 ntBASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AL451139.1-201ENST00000434718 346 ntBASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 FKBP1BP1-201ENST00000553366 325 ntBASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 AC012618.3-205ENST00000637896 1496 ntBASIC7.48□□□□□ -1.21
VPS8Q8N3P4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
VPS8Q8N3P4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 AC104623.2-202ENST00000623477 4002 ntBASIC7.47□□□□□ -1.21
VPS8Q8N3P4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 AL031119.1-201ENST00000404707 1879 ntBASIC7.47□□□□□ -1.21
VPS8Q8N3P4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 RNA5SP397-201ENST00000391323 118 ntBASIC7.47□□□□□ -1.21
VPS8Q8N3P4 CEACAMP6-201ENST00000452007 574 ntBASIC7.47□□□□□ -1.21
VPS8Q8N3P4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
VPS8Q8N3P4 DEFB109A-201ENST00000482450 265 ntBASIC7.47□□□□□ -1.21
VPS8Q8N3P4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms