Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 RNA5SP91-201ENST00000390902 119 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL008987.1-201ENST00000415528 237 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 CRIP1P1-201ENST00000427567 185 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 RPL34P27-201ENST00000428810 349 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 C8orf59P1-201ENST00000429930 303 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 ISCA1P2-201ENST00000438679 421 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL589880.1-201ENST00000448271 287 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 OR52J1P-201ENST00000450596 932 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 RNU1-88P-201ENST00000459274 128 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC092754.2-201ENST00000463506 460 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 RPL6P9-201ENST00000466502 859 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 STRADBP1-201ENST00000478954 1281 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC008410.1-201ENST00000483777 339 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 RPL32P33-201ENST00000487023 394 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC105384.2-201ENST00000508433 640 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 MTND3P5-201ENST00000512798 333 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC092593.2-201ENST00000513866 913 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 BUD31P1-201ENST00000521828 359 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC096996.1-201ENST00000563813 325 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC069366.1-201ENST00000583159 838 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 COX6CP7-201ENST00000597056 208 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL021997.1-201ENST00000605757 193 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 OR2AS2P-201ENST00000606902 342 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL133481.2-203ENST00000607558 139 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK3Q8IV63 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VRK3Q8IV63 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 AL392088.2-201ENST00000637607 285 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 DDX18P5-201ENST00000534547 1306 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK3Q8IV63 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VRK3Q8IV63 NEPNP-201ENST00000404786 1371 ntBASIC5.66□□□□□ -1.5
VRK3Q8IV63 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VRK3Q8IV63 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VRK3Q8IV63 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC007842.1-201ENST00000597336 2039 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 MTND5P29-201ENST00000458676 1807 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VRK3Q8IV63 OR52B3P-201ENST00000314715 928 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AL159987.1-201ENST00000347911 293 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 RNU4-92P-201ENST00000363783 136 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 OOSP1-201ENST00000398992 1270 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 HMGN1P20-201ENST00000411849 300 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AL445213.1-201ENST00000412589 747 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 RAP1BP1-201ENST00000412709 553 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 SETP15-201ENST00000412724 337 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AL158825.1-201ENST00000414735 521 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 RPS3AP37-201ENST00000419176 745 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 IPPKP1-201ENST00000422501 768 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 KCTD9P1-201ENST00000430462 1167 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 MTCO1P43-201ENST00000431831 488 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 GTF2IP3-201ENST00000433887 494 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 UBE2D3P4-201ENST00000441973 436 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC011476.1-201ENST00000466725 307 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms