Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 Y_RNA.578-201ENST00000390903 88 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL031985.1-201ENST00000392713 418 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 RNU4-22P-201ENST00000411058 166 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 RPS26P38-201ENST00000414476 348 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 TAF13P2-201ENST00000416876 286 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC093155.2-201ENST00000420734 937 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 NME1P1-201ENST00000420914 382 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL022331.1-201ENST00000429025 477 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL389925.1-201ENST00000432257 728 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL591719.1-201ENST00000444669 744 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 PTGES3P5-201ENST00000455109 434 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 CDC42P1-201ENST00000456658 548 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 RPS23P6-201ENST00000466136 431 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 METTL15P1-201ENST00000481421 1045 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC022215.1-201ENST00000481770 362 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC009120.1-201ENST00000493458 473 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 MTND4LP2-201ENST00000502312 285 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC074255.1-201ENST00000511259 501 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC112673.1-201ENST00000513168 575 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC139365.2-201ENST00000517972 253 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 OR7E128P-201ENST00000532736 1024 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 NPM1P47-201ENST00000560843 856 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 CYP2C60P-201ENST00000566088 139 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AC009464.1-201ENST00000615731 469 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 AL359955.1-201ENST00000455242 3275 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RNF44Q7L0R7 MFSD8-219ENST00000641228 2559 ntBASIC5.53□□□□□ -1.52
RNF44Q7L0R7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.52□□□□□ -1.53
RNF44Q7L0R7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 RNU6-353P-201ENST00000364266 108 ntBASIC5.52□□□□□ -1.53
RNF44Q7L0R7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 GNG5P2-201ENST00000372054 207 ntBASIC5.52□□□□□ -1.53
RNF44Q7L0R7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF44Q7L0R7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms