Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC069200.1-201ENST00000609511 323 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC244100.1-202ENST00000621554 382 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 MIR492-201ENST00000638676 116 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 OR5P1P-201ENST00000299512 925 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 RNA5SP90-201ENST00000364801 99 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 MIR634-201ENST00000385208 97 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 TRAV35-201ENST00000390462 330 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 ATP5F1P2-201ENST00000398143 760 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AL357515.1-201ENST00000402967 542 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 ACTR3P2-201ENST00000439585 1257 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AL354714.3-201ENST00000447284 493 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 NUTF2P3-201ENST00000448540 384 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 RPL7AP52-201ENST00000458096 790 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC026726.1-201ENST00000512859 601 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 OR4A17P-201ENST00000526032 904 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 PMS2P3-207ENST00000529061 717 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC022034.1-201ENST00000512867 2156 ntBASIC4.32□□□□□ -1.72
LRRK2Q5S007 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRK2Q5S007 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 CAST-222ENST00000508579 1758 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 RAB9AP4-201ENST00000415230 609 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 H3F3BP1-201ENST00000440551 403 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 RPS17P2-201ENST00000461663 408 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC105129.1-201ENST00000560250 297 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 AGGF1P6-201ENST00000569213 976 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 SNORA66-201ENST00000384792 133 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 RPS26P8-201ENST00000393490 348 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 RPS29P17-201ENST00000430795 166 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC011742.2-201ENST00000443818 352 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC020779.1-201ENST00000478757 796 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 SOX5P1-201ENST00000524155 1127 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC027807.1-201ENST00000559921 996 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 ARF4P1-201ENST00000605447 541 ntBASIC4.31□□□□□ -1.72
LRRK2Q5S007 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRK2Q5S007 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRK2Q5S007 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRK2Q5S007 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRK2Q5S007 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRK2Q5S007 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRK2Q5S007 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms