Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.32□□□□□ -1.56
RAE1P78406 AC087565.3-203ENST00000641018 837 ntBASIC5.32□□□□□ -1.56
RAE1P78406 AC139713.2-210ENST00000641741 992 ntBASIC5.32□□□□□ -1.56
RAE1P78406 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RAE1P78406 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.32□□□□□ -1.56
RAE1P78406 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.32□□□□□ -1.56
RAE1P78406 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
RAE1P78406 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.31□□□□□ -1.56
RAE1P78406 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 SRRM1P3-201ENST00000426911 2678 ntBASIC5.31□□□□□ -1.56
RAE1P78406 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 AP002512.4-202ENST00000641599 4530 ntBASIC5.31□□□□□ -1.56
RAE1P78406 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.31□□□□□ -1.56
RAE1P78406 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RAE1P78406 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RAE1P78406 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.31□□□□□ -1.56
RAE1P78406 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 OR52B3P-201ENST00000314715 928 ntBASIC5.31□□□□□ -1.56
RAE1P78406 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RAE1P78406 MIR375-201ENST00000362103 64 ntBASIC5.31□□□□□ -1.56
RAE1P78406 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 RNU4-31P-201ENST00000384211 141 ntBASIC5.31□□□□□ -1.56
RAE1P78406 MIR513B-201ENST00000385136 84 ntBASIC5.31□□□□□ -1.56
RAE1P78406 MTCO2P31-201ENST00000402702 684 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC099535.1-201ENST00000408928 371 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 RIMKLBP2-201ENST00000424737 654 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.31□□□□□ -1.56
RAE1P78406 RN7SL583P-201ENST00000475692 287 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC087672.1-201ENST00000479876 766 ntBASIC5.31□□□□□ -1.56
RAE1P78406 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 RN7SL649P-201ENST00000496974 275 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.31□□□□□ -1.56
RAE1P78406 AC093815.1-201ENST00000508637 280 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.31□□□□□ -1.56
RAE1P78406 AL109741.3-201ENST00000561748 592 ntBASIC5.31□□□□□ -1.56
RAE1P78406 RBM22P12-201ENST00000567098 1255 ntBASIC5.31□□□□□ -1.56
RAE1P78406 MIR4433B-201ENST00000581329 102 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AL138895.2-201ENST00000603019 178 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 AL139124.1-201ENST00000609123 421 ntBASIC5.31□□□□□ -1.56
RAE1P78406 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 AC021755.4-201ENST00000616620 456 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.31□□□□□ -1.56
RAE1P78406 AL121890.3-201ENST00000618494 516 ntBASIC5.31□□□□□ -1.56
RAE1P78406 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.31□□□□□ -1.56
RAE1P78406 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RAE1P78406 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.31□□□□□ -1.56
RAE1P78406 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.31□□□□□ -1.56
RAE1P78406 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.31□□□□□ -1.56
RAE1P78406 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAE1P78406 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAE1P78406 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAE1P78406 AC107021.2-201ENST00000567714 2095 ntBASIC5.3□□□□□ -1.56
RAE1P78406 MT-RNR2-201ENST00000387347 1559 ntBASIC5.3□□□□□ -1.56
RAE1P78406 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.3□□□□□ -1.56
RAE1P78406 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAE1P78406 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.3□□□□□ -1.56
RAE1P78406 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RAE1P78406 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.3□□□□□ -1.56
RAE1P78406 SNORA70.6-201ENST00000383934 134 ntBASIC5.3□□□□□ -1.56
RAE1P78406 RNY3P9-201ENST00000384727 106 ntBASIC5.3□□□□□ -1.56
RAE1P78406 VN1R12P-201ENST00000403778 876 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AC092638.1-201ENST00000411966 1275 ntBASIC5.3□□□□□ -1.56
RAE1P78406 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.3□□□□□ -1.56
RAE1P78406 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.3□□□□□ -1.56
RAE1P78406 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.3□□□□□ -1.56
RAE1P78406 PRUNEP1-201ENST00000425846 705 ntBASIC5.3□□□□□ -1.56
RAE1P78406 AC009784.1-201ENST00000426484 460 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms