Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MUC2-202ENST00000613187 4845 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCNA1P78396 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.82□□□□□ -1.48
CCNA1P78396 RNU11-201ENST00000387069 134 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 AC092570.3-201ENST00000420113 693 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.82□□□□□ -1.48
CCNA1P78396 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.82□□□□□ -1.48
CCNA1P78396 AC090058.1-201ENST00000498788 435 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.82□□□□□ -1.48
CCNA1P78396 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.82□□□□□ -1.48
CCNA1P78396 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.82□□□□□ -1.48
CCNA1P78396 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.82□□□□□ -1.48
CCNA1P78396 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.82□□□□□ -1.48
CCNA1P78396 AL360012.1-201ENST00000602813 131 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 AL512782.1-201ENST00000603093 364 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 AC011626.1-201ENST00000604710 562 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.82□□□□□ -1.48
CCNA1P78396 Z95327.3-201ENST00000610385 572 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 AC074140.1-201ENST00000621617 208 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 AC005618.4-201ENST00000625053 554 ntBASIC5.82□□□□□ -1.48
CCNA1P78396 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.82□□□□□ -1.48
CCNA1P78396 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CCNA1P78396 AC006484.1-201ENST00000435086 1884 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCNA1P78396 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCNA1P78396 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCNA1P78396 SMG1P7-201ENST00000565246 2704 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AC006210.2-201ENST00000367074 1545 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCNA1P78396 RNU6-249P-201ENST00000363016 102 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 HMGB3P7-201ENST00000400214 611 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 MTND4LP21-201ENST00000415303 295 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 COX6CP17-201ENST00000421389 185 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 C4BPAP2-201ENST00000428434 478 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 SNRPFP2-201ENST00000440710 251 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.81□□□□□ -1.48
CCNA1P78396 NOP56P2-201ENST00000447491 769 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.81□□□□□ -1.48
CCNA1P78396 OR1H1P-201ENST00000448731 937 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.81□□□□□ -1.48
CCNA1P78396 IGHV5-78-201ENST00000450948 295 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AC239798.3-201ENST00000454459 408 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.81□□□□□ -1.48
CCNA1P78396 AL356390.1-201ENST00000455684 397 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.81□□□□□ -1.48
CCNA1P78396 AC020937.1-201ENST00000519677 1013 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 OR8Q1P-201ENST00000526467 655 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AL358913.1-201ENST00000554342 121 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.81□□□□□ -1.48
CCNA1P78396 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.81□□□□□ -1.48
CCNA1P78396 MIR7853-201ENST00000584820 132 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.81□□□□□ -1.48
CCNA1P78396 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.81□□□□□ -1.48
CCNA1P78396 AC000095.2-202ENST00000637415 154 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCNA1P78396 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCNA1P78396 AC073869.10-201ENST00000642016 354 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 AC097461.1-201ENST00000568928 2821 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCNA1P78396 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCNA1P78396 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCNA1P78396 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.81□□□□□ -1.48
CCNA1P78396 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCNA1P78396 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.81□□□□□ -1.48
CCNA1P78396 AL121839.2-201ENST00000565058 6943 ntBASIC5.81□□□□□ -1.48
CCNA1P78396 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCNA1P78396 AC099654.2-201ENST00000433031 1980 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 ABCC13-202ENST00000463099 3842 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.8□□□□□ -1.48
CCNA1P78396 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCNA1P78396 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 AC138907.8-201ENST00000623981 2256 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 TTC39DP-201ENST00000416781 1688 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
CCNA1P78396 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 RNA5SP505-201ENST00000364748 108 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCNA1P78396 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCNA1P78396 NPM1P37-201ENST00000403105 874 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 RPL10P10-201ENST00000403509 664 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 AF186996.5-201ENST00000418098 904 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.8□□□□□ -1.48
CCNA1P78396 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.8□□□□□ -1.48
CCNA1P78396 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.8□□□□□ -1.48
CCNA1P78396 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCNA1P78396 AL359265.1-201ENST00000440296 795 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 TPT1P12-201ENST00000448968 492 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.8□□□□□ -1.48
CCNA1P78396 RPS12P31-201ENST00000491419 398 ntBASIC5.8□□□□□ -1.48
CCNA1P78396 RPL23AP72-201ENST00000492447 435 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms