Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.43□□□□□ -1.7
ACTBP60709 RNA5SP249-201ENST00000516127 99 ntBASIC4.43□□□□□ -1.7
ACTBP60709 snoU109.6-201ENST00000516831 118 ntBASIC4.43□□□□□ -1.7
ACTBP60709 RN7SKP99-201ENST00000517028 307 ntBASIC4.43□□□□□ -1.7
ACTBP60709 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.43□□□□□ -1.7
ACTBP60709 NRBF2P4-201ENST00000520874 850 ntBASIC4.43□□□□□ -1.7
ACTBP60709 RPL23AP53-201ENST00000521854 457 ntBASIC4.43□□□□□ -1.7
ACTBP60709 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.43□□□□□ -1.7
ACTBP60709 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.43□□□□□ -1.7
ACTBP60709 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.43□□□□□ -1.7
ACTBP60709 DYNLL1P4-201ENST00000549314 266 ntBASIC4.43□□□□□ -1.7
ACTBP60709 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.43□□□□□ -1.7
ACTBP60709 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.43□□□□□ -1.7
ACTBP60709 MIR4505-201ENST00000582238 73 ntBASIC4.43□□□□□ -1.7
ACTBP60709 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.43□□□□□ -1.7
ACTBP60709 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.43□□□□□ -1.7
ACTBP60709 AL135786.2-201ENST00000608422 615 ntBASIC4.43□□□□□ -1.7
ACTBP60709 AC127024.6-201ENST00000621598 424 ntBASIC4.43□□□□□ -1.7
ACTBP60709 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ACTBP60709 RNF19BPY-201ENST00000458209 1550 ntBASIC4.43□□□□□ -1.7
ACTBP60709 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ACTBP60709 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ACTBP60709 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.43□□□□□ -1.7
ACTBP60709 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ACTBP60709 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ACTBP60709 MAPK10-304ENST00000641341 3984 ntBASIC4.43□□□□□ -1.7
ACTBP60709 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.43□□□□□ -1.7
ACTBP60709 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.43□□□□□ -1.7
ACTBP60709 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.43□□□□□ -1.7
ACTBP60709 MAPK10-286ENST00000641208 8747 ntBASIC4.42□□□□□ -1.7
ACTBP60709 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ACTBP60709 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTBP60709 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTBP60709 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.42□□□□□ -1.7
ACTBP60709 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ACTBP60709 TMSB4XP4-201ENST00000323496 618 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AL031985.1-201ENST00000392713 418 ntBASIC4.42□□□□□ -1.7
ACTBP60709 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTBP60709 AL596448.1-201ENST00000415024 392 ntBASIC4.42□□□□□ -1.7
ACTBP60709 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.42□□□□□ -1.7
ACTBP60709 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 COX6CP13-201ENST00000428703 226 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.42□□□□□ -1.7
ACTBP60709 AL161636.2-201ENST00000445179 927 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.42□□□□□ -1.7
ACTBP60709 YWHAEP1-201ENST00000453697 763 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AC020890.1-201ENST00000491837 504 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AC005412.2-201ENST00000492004 341 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.42□□□□□ -1.7
ACTBP60709 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.42□□□□□ -1.7
ACTBP60709 UGT2A3P7-201ENST00000510485 734 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.42□□□□□ -1.7
ACTBP60709 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.42□□□□□ -1.7
ACTBP60709 AP004607.2-201ENST00000533949 322 ntBASIC4.42□□□□□ -1.7
ACTBP60709 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
ACTBP60709 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.42□□□□□ -1.7
ACTBP60709 AC135626.1-201ENST00000556983 435 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AC090312.1-201ENST00000580637 348 ntBASIC4.42□□□□□ -1.7
ACTBP60709 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.42□□□□□ -1.7
ACTBP60709 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 AC118658.2-201ENST00000618697 459 ntBASIC4.42□□□□□ -1.7
ACTBP60709 AL357153.4-201ENST00000620487 1016 ntBASIC4.42□□□□□ -1.7
ACTBP60709 CU639417.4-201ENST00000623928 207 ntBASIC4.42□□□□□ -1.7
ACTBP60709 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTBP60709 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ACTBP60709 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTBP60709 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
ACTBP60709 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.42□□□□□ -1.7
ACTBP60709 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 AC027290.2-201ENST00000623210 18662 ntBASIC4.41□□□□□ -1.7
ACTBP60709 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
ACTBP60709 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ACTBP60709 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTBP60709 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTBP60709 AL034370.1-201ENST00000397254 1590 ntBASIC4.41□□□□□ -1.7
ACTBP60709 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
ACTBP60709 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTBP60709 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.41□□□□□ -1.7
ACTBP60709 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.41□□□□□ -1.7
ACTBP60709 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ACTBP60709 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.41□□□□□ -1.7
ACTBP60709 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.41□□□□□ -1.7
ACTBP60709 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.41□□□□□ -1.7
ACTBP60709 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTBP60709 U3.32-201ENST00000408116 212 ntBASIC4.41□□□□□ -1.7
ACTBP60709 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACTBP60709 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.41□□□□□ -1.7
ACTBP60709 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.41□□□□□ -1.7
ACTBP60709 AL139148.1-201ENST00000427122 680 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms