Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MIR133B-201ENST00000362210 119 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
FOXA3P55318 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
FOXA3P55318 AC004386.1-201ENST00000393214 761 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
FOXA3P55318 AL512430.2-201ENST00000406786 339 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 OR6E1P-201ENST00000414424 923 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXA3P55318 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 DSTNP5-201ENST00000427921 523 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC110602.1-201ENST00000437414 318 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXA3P55318 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXA3P55318 PTMAP3-201ENST00000447474 330 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AL691482.1-201ENST00000453255 87 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 HLA-DPA3-207ENST00000454398 229 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC118758.1-202ENST00000454719 225 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 HMGB1P4-201ENST00000455362 567 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXA3P55318 RNU7-157P-201ENST00000459600 66 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC113430.1-201ENST00000506872 718 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXA3P55318 AC109481.1-201ENST00000509173 282 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC006499.4-201ENST00000510947 694 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXA3P55318 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXA3P55318 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXA3P55318 AC026979.4-201ENST00000606555 645 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 AC244517.3-201ENST00000616254 1235 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC009704.2-201ENST00000618739 483 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXA3P55318 AC005086.4-201ENST00000623065 213 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXA3P55318 AC006453.5-201ENST00000636451 619 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 MIR193BHG-214ENST00000641765 509 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 CASC19-274ENST00000642018 970 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 AL450326.2-201ENST00000421913 1962 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 AL592182.3-201ENST00000642132 3304 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXA3P55318 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
FOXA3P55318 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
FOXA3P55318 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXA3P55318 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXA3P55318 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXA3P55318 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXA3P55318 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXA3P55318 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXA3P55318 RNU1-20P-201ENST00000363314 162 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
FOXA3P55318 ATP5HP3-201ENST00000396994 486 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
FOXA3P55318 MIR921-201ENST00000401133 56 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 MIR1182-201ENST00000408363 97 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.69□□□□□ -1.82
FOXA3P55318 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXA3P55318 BMS1P17-202ENST00000416720 316 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.69□□□□□ -1.82
FOXA3P55318 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.69□□□□□ -1.82
FOXA3P55318 AC066692.1-201ENST00000421721 457 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXA3P55318 RPS29P9-201ENST00000440360 171 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 AC073052.1-201ENST00000440417 714 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXA3P55318 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXA3P55318 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXA3P55318 AC239798.3-201ENST00000454459 408 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXA3P55318 AC019084.1-201ENST00000457337 432 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 EIF2S2P5-201ENST00000457635 968 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 RPL7AP28-201ENST00000464513 571 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 AC104971.1-201ENST00000495117 578 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXA3P55318 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.69□□□□□ -1.82
FOXA3P55318 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXA3P55318 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXA3P55318 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXA3P55318 HMGB1P40-201ENST00000525121 540 ntBASIC3.69□□□□□ -1.82
FOXA3P55318 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
FOXA3P55318 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms