Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.64□□□□□ -1.51
VCPP55072 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VCPP55072 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VCPP55072 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
VCPP55072 MTND5P23-201ENST00000430812 1655 ntBASIC5.63□□□□□ -1.51
VCPP55072 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 AC211486.3-201ENST00000412694 621 ntBASIC5.63□□□□□ -1.51
VCPP55072 AC012519.1-201ENST00000424588 610 ntBASIC5.63□□□□□ -1.51
VCPP55072 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.63□□□□□ -1.51
VCPP55072 AC017019.1-201ENST00000426129 261 ntBASIC5.63□□□□□ -1.51
VCPP55072 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.63□□□□□ -1.51
VCPP55072 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.63□□□□□ -1.51
VCPP55072 AC012512.1-201ENST00000446594 718 ntBASIC5.63□□□□□ -1.51
VCPP55072 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.63□□□□□ -1.51
VCPP55072 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.63□□□□□ -1.51
VCPP55072 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.63□□□□□ -1.51
VCPP55072 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.63□□□□□ -1.51
VCPP55072 SCARNA16.4-201ENST00000516956 187 ntBASIC5.63□□□□□ -1.51
VCPP55072 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.63□□□□□ -1.51
VCPP55072 AC092709.1-201ENST00000521355 1045 ntBASIC5.63□□□□□ -1.51
VCPP55072 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.63□□□□□ -1.51
VCPP55072 AC022616.2-201ENST00000523185 300 ntBASIC5.63□□□□□ -1.51
VCPP55072 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.63□□□□□ -1.51
VCPP55072 HMGB1P40-201ENST00000525121 540 ntBASIC5.63□□□□□ -1.51
VCPP55072 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 AC008126.1-201ENST00000549019 480 ntBASIC5.63□□□□□ -1.51
VCPP55072 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.63□□□□□ -1.51
VCPP55072 MIR4660-201ENST00000583549 74 ntBASIC5.63□□□□□ -1.51
VCPP55072 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 AL161616.1-201ENST00000611867 286 ntBASIC5.63□□□□□ -1.51
VCPP55072 AC109583.2-201ENST00000617367 129 ntBASIC5.63□□□□□ -1.51
VCPP55072 AC074140.1-201ENST00000621617 208 ntBASIC5.63□□□□□ -1.51
VCPP55072 AP003072.5-201ENST00000623872 773 ntBASIC5.63□□□□□ -1.51
VCPP55072 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.63□□□□□ -1.51
VCPP55072 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.63□□□□□ -1.51
VCPP55072 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VCPP55072 AC003985.2-201ENST00000562268 1669 ntBASIC5.63□□□□□ -1.51
VCPP55072 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.62□□□□□ -1.51
VCPP55072 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VCPP55072 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
VCPP55072 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
VCPP55072 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VCPP55072 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.62□□□□□ -1.51
VCPP55072 RNU1-146P-201ENST00000364015 165 ntBASIC5.62□□□□□ -1.51
VCPP55072 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VCPP55072 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VCPP55072 SNORA48.4-201ENST00000391089 134 ntBASIC5.62□□□□□ -1.51
VCPP55072 AL358178.1-201ENST00000407698 397 ntBASIC5.62□□□□□ -1.51
VCPP55072 RN7SKP126-201ENST00000411143 300 ntBASIC5.62□□□□□ -1.51
VCPP55072 AC019050.1-201ENST00000418508 492 ntBASIC5.62□□□□□ -1.51
VCPP55072 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.62□□□□□ -1.51
VCPP55072 SETP10-201ENST00000424368 814 ntBASIC5.62□□□□□ -1.51
VCPP55072 AL355994.1-201ENST00000424379 260 ntBASIC5.62□□□□□ -1.51
VCPP55072 HSPD1P12-201ENST00000429127 1069 ntBASIC5.62□□□□□ -1.51
VCPP55072 RPL19P16-201ENST00000433839 588 ntBASIC5.62□□□□□ -1.51
VCPP55072 AC008072.1-201ENST00000434254 824 ntBASIC5.62□□□□□ -1.51
VCPP55072 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.62□□□□□ -1.51
VCPP55072 SNRPFP2-201ENST00000440710 251 ntBASIC5.62□□□□□ -1.51
VCPP55072 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VCPP55072 SLC25A15P5-201ENST00000508033 253 ntBASIC5.62□□□□□ -1.51
VCPP55072 AC098976.1-201ENST00000513014 541 ntBASIC5.62□□□□□ -1.51
VCPP55072 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VCPP55072 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.62□□□□□ -1.51
VCPP55072 AL020997.2-201ENST00000602607 184 ntBASIC5.62□□□□□ -1.51
VCPP55072 OR51C1P-201ENST00000608504 942 ntBASIC5.62□□□□□ -1.51
VCPP55072 AC244107.2-201ENST00000611773 76 ntBASIC5.62□□□□□ -1.51
VCPP55072 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VCPP55072 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.62□□□□□ -1.51
VCPP55072 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.62□□□□□ -1.51
VCPP55072 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VCPP55072 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VCPP55072 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
VCPP55072 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VCPP55072 SNORA17.1-201ENST00000362945 126 ntBASIC5.61□□□□□ -1.51
VCPP55072 RNA5SP505-201ENST00000364748 108 ntBASIC5.61□□□□□ -1.51
VCPP55072 AL353625.1-202ENST00000366273 571 ntBASIC5.61□□□□□ -1.51
VCPP55072 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VCPP55072 AC068538.1-201ENST00000376856 336 ntBASIC5.61□□□□□ -1.51
VCPP55072 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.61□□□□□ -1.51
VCPP55072 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
VCPP55072 DBIP1-201ENST00000401435 260 ntBASIC5.61□□□□□ -1.51
VCPP55072 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VCPP55072 TTC39DP-201ENST00000416781 1688 ntBASIC5.61□□□□□ -1.51
VCPP55072 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.61□□□□□ -1.51
VCPP55072 AL121878.1-201ENST00000418638 859 ntBASIC5.61□□□□□ -1.51
VCPP55072 RPL17P36-201ENST00000420302 549 ntBASIC5.61□□□□□ -1.51
VCPP55072 DNAJC19P7-201ENST00000428811 344 ntBASIC5.61□□□□□ -1.51
VCPP55072 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.61□□□□□ -1.51
VCPP55072 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms