Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6□□□□□ -1.45
NUP98P52948 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6□□□□□ -1.45
NUP98P52948 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NUP98P52948 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP98P52948 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP98P52948 AP001781.1-201ENST00000530977 207 ntBASIC5.99□□□□□ -1.45
NUP98P52948 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.99□□□□□ -1.45
NUP98P52948 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.99□□□□□ -1.45
NUP98P52948 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP98P52948 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NUP98P52948 AC114781.5-201ENST00000615297 108 ntBASIC5.99□□□□□ -1.45
NUP98P52948 BX005214.3-202ENST00000619809 325 ntBASIC5.99□□□□□ -1.45
NUP98P52948 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.99□□□□□ -1.45
NUP98P52948 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP98P52948 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP98P52948 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
NUP98P52948 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NUP98P52948 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP98P52948 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP98P52948 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUP98P52948 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP98P52948 CCT8P1-201ENST00000413611 1657 ntBASIC5.99□□□□□ -1.45
NUP98P52948 RNA5SP447-201ENST00000363749 119 ntBASIC5.99□□□□□ -1.45
NUP98P52948 MIR298-201ENST00000401212 88 ntBASIC5.99□□□□□ -1.45
NUP98P52948 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.99□□□□□ -1.45
NUP98P52948 LINC00993-201ENST00000420453 540 ntBASIC5.99□□□□□ -1.45
NUP98P52948 AC091868.1-201ENST00000508746 304 ntBASIC5.99□□□□□ -1.45
NUP98P52948 MIR4284-201ENST00000578924 81 ntBASIC5.99□□□□□ -1.45
NUP98P52948 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.99□□□□□ -1.45
NUP98P52948 PRELID3BP3-201ENST00000584963 545 ntBASIC5.99□□□□□ -1.45
NUP98P52948 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUP98P52948 U3.53-201ENST00000628922 216 ntBASIC5.99□□□□□ -1.45
NUP98P52948 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
NUP98P52948 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.99□□□□□ -1.45
NUP98P52948 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP98P52948 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP98P52948 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.98□□□□□ -1.45
NUP98P52948 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP98P52948 AC002525.1-201ENST00000624392 1622 ntBASIC5.98□□□□□ -1.45
NUP98P52948 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP98P52948 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.98□□□□□ -1.45
NUP98P52948 AC108463.1-201ENST00000450258 347 ntBASIC5.98□□□□□ -1.45
NUP98P52948 Z95152.1-201ENST00000453556 656 ntBASIC5.98□□□□□ -1.45
NUP98P52948 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP98P52948 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP98P52948 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP98P52948 SCARNA9-201ENST00000530422 353 ntBASIC5.98□□□□□ -1.45
NUP98P52948 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.98□□□□□ -1.45
NUP98P52948 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP98P52948 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP98P52948 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUP98P52948 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NUP98P52948 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP98P52948 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP98P52948 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.98□□□□□ -1.45
NUP98P52948 AC092451.3-201ENST00000625067 1343 ntBASIC5.98□□□□□ -1.45
NUP98P52948 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
NUP98P52948 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
NUP98P52948 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.98□□□□□ -1.45
NUP98P52948 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUP98P52948 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
NUP98P52948 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NUP98P52948 RGS17P1-201ENST00000423358 553 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AC234779.1-201ENST00000425910 285 ntBASIC5.97□□□□□ -1.45
NUP98P52948 RN7SL517P-201ENST00000462240 305 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AC109327.1-201ENST00000471666 403 ntBASIC5.97□□□□□ -1.45
NUP98P52948 NIFKP7-201ENST00000503365 834 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.97□□□□□ -1.45
NUP98P52948 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.97□□□□□ -1.45
NUP98P52948 AC068831.4-201ENST00000556118 109 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AC002044.3-201ENST00000623314 541 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AP000843.1-201ENST00000624880 701 ntBASIC5.97□□□□□ -1.45
NUP98P52948 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
NUP98P52948 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP98P52948 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NUP98P52948 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NUP98P52948 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP98P52948 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP98P52948 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP98P52948 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NUP98P52948 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.97□□□□□ -1.45
NUP98P52948 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP98P52948 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP98P52948 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.97□□□□□ -1.45
NUP98P52948 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
NUP98P52948 AL592293.2-201ENST00000422292 996 ntBASIC5.97□□□□□ -1.45
NUP98P52948 RPL12P34-201ENST00000424532 479 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AC010326.1-201ENST00000462726 602 ntBASIC5.97□□□□□ -1.45
NUP98P52948 OR11I1P-201ENST00000486033 954 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AK3P4-201ENST00000504283 583 ntBASIC5.97□□□□□ -1.45
NUP98P52948 RN7SKP122-201ENST00000515923 296 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AC100784.1-201ENST00000522790 310 ntBASIC5.97□□□□□ -1.45
NUP98P52948 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.97□□□□□ -1.45
NUP98P52948 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.97□□□□□ -1.45
NUP98P52948 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NUP98P52948 AGGF1P9-201ENST00000561884 913 ntBASIC5.97□□□□□ -1.45
NUP98P52948 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms