Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CR1P49238 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CX3CR1P49238 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.5□□□□□ -1.69
CX3CR1P49238 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CX3CR1P49238 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.5□□□□□ -1.69
CX3CR1P49238 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 RNA5SP242-201ENST00000364171 118 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.5□□□□□ -1.69
CX3CR1P49238 RN7SKP16-201ENST00000410180 299 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 RN7SKP59-201ENST00000410520 314 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.5□□□□□ -1.69
CX3CR1P49238 AC093655.2-201ENST00000425735 631 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC079807.1-201ENST00000429993 481 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AL389925.1-201ENST00000432257 728 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 BTG3P1-201ENST00000435859 716 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 Z92846.1-201ENST00000456203 268 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 RN7SL346P-201ENST00000491561 294 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC015864.1-201ENST00000496512 544 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.5□□□□□ -1.69
CX3CR1P49238 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.5□□□□□ -1.69
CX3CR1P49238 RPS4XP20-201ENST00000505751 772 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 CCNHP1-201ENST00000513311 678 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC138938.1-201ENST00000515431 782 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 RNA5SP362-201ENST00000516048 118 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CX3CR1P49238 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.5□□□□□ -1.69
CX3CR1P49238 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.5□□□□□ -1.69
CX3CR1P49238 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.5□□□□□ -1.69
CX3CR1P49238 DPRXP4-201ENST00000578053 568 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC011840.5-201ENST00000582125 771 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.5□□□□□ -1.69
CX3CR1P49238 AC069307.1-201ENST00000602820 447 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC018695.5-201ENST00000605872 315 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC079395.2-201ENST00000610982 737 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.5□□□□□ -1.69
CX3CR1P49238 NF1P10-201ENST00000613227 742 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC108359.1-201ENST00000616451 1211 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 AC026124.2-201ENST00000621847 656 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.5□□□□□ -1.69
CX3CR1P49238 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
CX3CR1P49238 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.5□□□□□ -1.69
CX3CR1P49238 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.5□□□□□ -1.69
CX3CR1P49238 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CX3CR1P49238 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CX3CR1P49238 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 AC027228.2-201ENST00000567141 2154 ntBASIC4.5□□□□□ -1.69
CX3CR1P49238 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.5□□□□□ -1.69
CX3CR1P49238 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CR1P49238 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
CX3CR1P49238 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CR1P49238 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CR1P49238 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.49□□□□□ -1.69
CX3CR1P49238 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CX3CR1P49238 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CX3CR1P49238 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CR1P49238 MIR323A-201ENST00000362199 86 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 UBBP2-201ENST00000376781 231 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CX3CR1P49238 MIR600-201ENST00000385007 98 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AC005522.1-201ENST00000395416 346 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 RNA5SP296-201ENST00000410523 111 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 AC013470.3-201ENST00000420252 1194 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 OR2AH1P-201ENST00000425717 928 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.49□□□□□ -1.69
CX3CR1P49238 GAPDHP34-201ENST00000432112 823 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.49□□□□□ -1.69
CX3CR1P49238 AL031584.1-201ENST00000447169 754 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AC144530.1-201ENST00000452862 555 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
CX3CR1P49238 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.49□□□□□ -1.69
CX3CR1P49238 HMGB3P16-201ENST00000508037 287 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.49□□□□□ -1.69
CX3CR1P49238 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CR1P49238 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.49□□□□□ -1.69
CX3CR1P49238 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.49□□□□□ -1.69
CX3CR1P49238 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 AP005131.7-201ENST00000610087 611 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AC015922.4-201ENST00000612568 690 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AL359513.1-201ENST00000614364 557 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AC037198.3-201ENST00000616754 526 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AC015914.2-201ENST00000618167 288 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 AC022106.2-201ENST00000620114 757 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms