Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.2□□□□□ -1.42
TM4SF4P48230 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TM4SF4P48230 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TM4SF4P48230 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.2□□□□□ -1.42
TM4SF4P48230 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.19□□□□□ -1.42
TM4SF4P48230 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 OR4K17-201ENST00000315543 1032 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 ATP5HP3-201ENST00000396994 486 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.19□□□□□ -1.42
TM4SF4P48230 SNORA79B-201ENST00000410557 148 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 RNU4-74P-201ENST00000411280 161 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 AL158050.1-201ENST00000416077 457 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 DDX39BP1-205ENST00000422507 192 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF4P48230 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.19□□□□□ -1.42
TM4SF4P48230 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.19□□□□□ -1.42
TM4SF4P48230 AC234781.3-201ENST00000452540 973 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF4P48230 AC121161.1-201ENST00000510606 652 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 TOMM22P4-201ENST00000511318 336 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 BTF3P13-201ENST00000513224 490 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 RNU5A-7P-201ENST00000515979 116 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 AC034205.1-201ENST00000520621 638 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
TM4SF4P48230 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.19□□□□□ -1.42
TM4SF4P48230 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF4P48230 OR8X1P-201ENST00000534542 869 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TM4SF4P48230 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.19□□□□□ -1.42
TM4SF4P48230 GLRXP2-201ENST00000555594 321 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 BGLT3-201ENST00000564523 994 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 UBE2FP2-201ENST00000566646 462 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 MIR4284-201ENST00000578924 81 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 MIR4691-201ENST00000583764 85 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 AC018809.2-201ENST00000602436 3823 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 AP003117.1-201ENST00000602771 554 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 AL391834.2-201ENST00000609982 546 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TM4SF4P48230 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.19□□□□□ -1.42
TM4SF4P48230 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 AC007996.1-201ENST00000620414 2821 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TM4SF4P48230 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 MTCO1P7-201ENST00000419523 1542 ntBASIC6.19□□□□□ -1.42
TM4SF4P48230 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.19□□□□□ -1.42
TM4SF4P48230 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TM4SF4P48230 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.18□□□□□ -1.42
TM4SF4P48230 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.18□□□□□ -1.42
TM4SF4P48230 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TM4SF4P48230 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TM4SF4P48230 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AL078621.3-201ENST00000623707 2042 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TM4SF4P48230 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TM4SF4P48230 SDAD1P1-202ENST00000524156 2051 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.18□□□□□ -1.42
TM4SF4P48230 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TM4SF4P48230 RNA5SP455-201ENST00000365190 119 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
TM4SF4P48230 XKRYP4-201ENST00000414395 483 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.18□□□□□ -1.42
TM4SF4P48230 XKRYP5-201ENST00000449659 483 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.18□□□□□ -1.42
TM4SF4P48230 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.18□□□□□ -1.42
TM4SF4P48230 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TM4SF4P48230 RPL23AP72-201ENST00000492447 435 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
TM4SF4P48230 NAMPTP2-201ENST00000505629 1115 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.18□□□□□ -1.42
TM4SF4P48230 HIGD1AP18-201ENST00000520730 278 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC122134.1-201ENST00000565664 1104 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 AC126365.2-201ENST00000580630 379 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 MIR5096-201ENST00000583713 70 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC011497.2-201ENST00000600255 639 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AP005229.2-201ENST00000609980 697 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC145207.9-201ENST00000623802 325 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.18□□□□□ -1.42
TM4SF4P48230 AC119674.1-212ENST00000641155 993 ntBASIC6.18□□□□□ -1.42
TM4SF4P48230 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TM4SF4P48230 HSPA8P19-201ENST00000505359 1517 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms