Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC4P35249 ZNF652P1-201ENST00000442420 1309 ntBASIC6.3□□□□□ -1.4
RFC4P35249 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 AC093297.3-201ENST00000607056 2517 ntBASIC6.3□□□□□ -1.4
RFC4P35249 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 AL442128.2-201ENST00000620246 1824 ntBASIC6.3□□□□□ -1.4
RFC4P35249 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RFC4P35249 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC4P35249 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC4P35249 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 RN7SKP227-201ENST00000364445 330 ntBASIC6.3□□□□□ -1.4
RFC4P35249 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RFC4P35249 AC007064.3-201ENST00000422608 359 ntBASIC6.3□□□□□ -1.4
RFC4P35249 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC4P35249 CEACAMP6-201ENST00000452007 574 ntBASIC6.3□□□□□ -1.4
RFC4P35249 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC4P35249 AC007537.2-201ENST00000472093 511 ntBASIC6.3□□□□□ -1.4
RFC4P35249 OR52A4P-201ENST00000472867 958 ntBASIC6.3□□□□□ -1.4
RFC4P35249 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.3□□□□□ -1.4
RFC4P35249 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.3□□□□□ -1.4
RFC4P35249 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC4P35249 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC4P35249 MIR4675-201ENST00000577898 77 ntBASIC6.3□□□□□ -1.4
RFC4P35249 AP001357.1-201ENST00000586304 1053 ntBASIC6.3□□□□□ -1.4
RFC4P35249 AC107993.1-201ENST00000591343 684 ntBASIC6.3□□□□□ -1.4
RFC4P35249 AC011453.2-201ENST00000603737 729 ntBASIC6.3□□□□□ -1.4
RFC4P35249 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.3□□□□□ -1.4
RFC4P35249 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RFC4P35249 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RFC4P35249 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC4P35249 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RFC4P35249 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.29□□□□□ -1.4
RFC4P35249 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
RFC4P35249 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RFC4P35249 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 AL590240.1-201ENST00000334118 313 ntBASIC6.29□□□□□ -1.4
RFC4P35249 IGKV7-3-201ENST00000357453 298 ntBASIC6.29□□□□□ -1.4
RFC4P35249 SNORA70F-201ENST00000384142 135 ntBASIC6.29□□□□□ -1.4
RFC4P35249 SNORA70.10-201ENST00000384515 134 ntBASIC6.29□□□□□ -1.4
RFC4P35249 ARL2BPP10-201ENST00000446487 531 ntBASIC6.29□□□□□ -1.4
RFC4P35249 RPS12P31-201ENST00000491419 398 ntBASIC6.29□□□□□ -1.4
RFC4P35249 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.29□□□□□ -1.4
RFC4P35249 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.29□□□□□ -1.4
RFC4P35249 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.29□□□□□ -1.4
RFC4P35249 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC4P35249 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.29□□□□□ -1.4
RFC4P35249 AC019322.1-201ENST00000571869 389 ntBASIC6.29□□□□□ -1.4
RFC4P35249 MLECP1-201ENST00000615893 709 ntBASIC6.29□□□□□ -1.4
RFC4P35249 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.29□□□□□ -1.4
RFC4P35249 OR52H1-202ENST00000641796 1061 ntBASIC6.29□□□□□ -1.4
RFC4P35249 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
RFC4P35249 AC007159.1-201ENST00000566529 4706 ntBASIC6.29□□□□□ -1.4
RFC4P35249 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC4P35249 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 AC009962.1-201ENST00000567327 3813 ntBASIC6.28□□□□□ -1.4
RFC4P35249 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 MFSD8-220ENST00000641243 1422 ntBASIC6.28□□□□□ -1.4
RFC4P35249 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
RFC4P35249 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFC4P35249 ATP5HP3-201ENST00000396994 486 ntBASIC6.28□□□□□ -1.4
RFC4P35249 AL049697.2-201ENST00000403708 294 ntBASIC6.28□□□□□ -1.4
RFC4P35249 GTF2IP2-201ENST00000424290 697 ntBASIC6.28□□□□□ -1.4
RFC4P35249 RPL23AP1-201ENST00000428990 471 ntBASIC6.28□□□□□ -1.4
RFC4P35249 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.28□□□□□ -1.4
RFC4P35249 AL359265.1-201ENST00000440296 795 ntBASIC6.28□□□□□ -1.4
RFC4P35249 RPS29P9-201ENST00000440360 171 ntBASIC6.28□□□□□ -1.4
RFC4P35249 TXNP5-201ENST00000441043 315 ntBASIC6.28□□□□□ -1.4
RFC4P35249 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC4P35249 AC098976.1-201ENST00000513014 541 ntBASIC6.28□□□□□ -1.4
RFC4P35249 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.28□□□□□ -1.4
RFC4P35249 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.28□□□□□ -1.4
RFC4P35249 AC012339.2-201ENST00000523996 453 ntBASIC6.28□□□□□ -1.4
RFC4P35249 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.28□□□□□ -1.4
RFC4P35249 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.28□□□□□ -1.4
RFC4P35249 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.28□□□□□ -1.4
RFC4P35249 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.28□□□□□ -1.4
RFC4P35249 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC4P35249 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 AC245389.2-201ENST00000616023 576 ntBASIC6.28□□□□□ -1.4
RFC4P35249 AC242843.1-201ENST00000618702 573 ntBASIC6.28□□□□□ -1.4
RFC4P35249 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms