Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 AP000756.2-201ENST00000624168 2567 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
COL4A5P29400 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A5P29400 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 OR14L1P-202ENST00000641545 3009 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
COL4A5P29400 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A5P29400 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A5P29400 H3F3BP1-201ENST00000440551 403 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A5P29400 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A5P29400 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A5P29400 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A5P29400 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A5P29400 AC007786.3-201ENST00000615154 596 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 ZYXP1-201ENST00000617638 118 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 AC000095.2-202ENST00000637415 154 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A5P29400 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A5P29400 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A5P29400 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
COL4A5P29400 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A5P29400 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A5P29400 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COL4A5P29400 AL731566.1-201ENST00000620490 1937 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 RPL12P9-201ENST00000412942 488 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A5P29400 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A5P29400 AC023271.1-201ENST00000445936 1090 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.75□□□□□ -1.49
COL4A5P29400 OR4A6P-201ENST00000534364 970 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.75□□□□□ -1.49
COL4A5P29400 MIR4420-201ENST00000583944 77 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 AC090948.1-201ENST00000607464 549 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A5P29400 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL4A5P29400 RNA5SP196-201ENST00000625967 102 ntBASIC5.75□□□□□ -1.49
COL4A5P29400 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
COL4A5P29400 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL4A5P29400 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A5P29400 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A5P29400 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.74□□□□□ -1.49
COL4A5P29400 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL4A5P29400 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL4A5P29400 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A5P29400 AL117339.4-201ENST00000608335 7063 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A5P29400 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.74□□□□□ -1.49
COL4A5P29400 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.74□□□□□ -1.49
COL4A5P29400 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL4A5P29400 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A5P29400 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL4A5P29400 AC004158.1-201ENST00000564508 4319 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A5P29400 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.74□□□□□ -1.49
COL4A5P29400 AL121657.1-201ENST00000327215 531 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 OR1L6-202ENST00000373684 1044 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 AL158073.1-201ENST00000426848 1104 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A5P29400 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.74□□□□□ -1.49
COL4A5P29400 AC138761.5-201ENST00000433967 325 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 RPS3AP54-201ENST00000435535 734 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A5P29400 SNORA84-201ENST00000459229 133 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 AC023424.1-201ENST00000496058 459 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 AC106806.2-201ENST00000509365 500 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 RNU1-6P-201ENST00000516290 144 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A5P29400 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.74□□□□□ -1.49
COL4A5P29400 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A5P29400 AC034105.4-201ENST00000568304 277 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 MIR4429-201ENST00000580105 73 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A5P29400 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.74□□□□□ -1.49
COL4A5P29400 ARF4P1-201ENST00000605447 541 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 AL591034.3-201ENST00000605511 685 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 AL121932.1-201ENST00000605542 214 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 SNX18P1Y-201ENST00000616231 511 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.74□□□□□ -1.49
COL4A5P29400 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A5P29400 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
COL4A5P29400 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms