Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC107027.3-201ENST00000565095 3473 ntBASIC4.98□□□□□ -1.61
PTPN6P29350 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN6P29350 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
PTPN6P29350 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 NXF4-202ENST00000416098 1465 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 RNU1-77P-201ENST00000390868 162 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 AC211486.3-201ENST00000412694 621 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN6P29350 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN6P29350 AJ239321.1-201ENST00000424255 564 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 BRWD1P3-201ENST00000428816 390 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN6P29350 CYCSP6-201ENST00000434498 302 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN6P29350 AC104634.1-201ENST00000452720 462 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 RNU6-775P-201ENST00000459318 96 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN6P29350 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.97□□□□□ -1.61
PTPN6P29350 OR8X1P-201ENST00000534542 869 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN6P29350 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN6P29350 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 AC020915.5-201ENST00000596836 964 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 AC009597.2-201ENST00000604659 592 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN6P29350 AC108359.1-201ENST00000616451 1211 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 MIR6837-201ENST00000620884 64 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 AC015722.2-201ENST00000622210 551 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 SAMMSON-227ENST00000642114 1199 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 AC110792.3-201ENST00000595906 1614 ntBASIC4.97□□□□□ -1.61
PTPN6P29350 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN6P29350 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN6P29350 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
PTPN6P29350 AC005332.5-201ENST00000591222 2919 ntBASIC4.96□□□□□ -1.61
PTPN6P29350 AC112198.2-201ENST00000426589 6996 ntBASIC4.96□□□□□ -1.61
PTPN6P29350 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PTPN6P29350 PCAT14-202ENST00000627127 3935 ntBASIC4.96□□□□□ -1.61
PTPN6P29350 AC100778.3-201ENST00000580060 1750 ntBASIC4.96□□□□□ -1.61
PTPN6P29350 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.96□□□□□ -1.61
PTPN6P29350 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.96□□□□□ -1.61
PTPN6P29350 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PTPN6P29350 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
PTPN6P29350 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PTPN6P29350 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN6P29350 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN6P29350 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN6P29350 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN6P29350 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PTPN6P29350 RNA5SP183-201ENST00000362452 119 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PTPN6P29350 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
PTPN6P29350 VDAC2P1-201ENST00000399358 958 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AC013470.3-201ENST00000420252 1194 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN6P29350 BX510359.3-201ENST00000422168 306 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.96□□□□□ -1.62
PTPN6P29350 CLUHP1-201ENST00000435012 1190 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 COPS8P2-201ENST00000473228 627 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 UBA52P7-201ENST00000486088 380 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.96□□□□□ -1.62
PTPN6P29350 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.96□□□□□ -1.62
PTPN6P29350 snoU109.6-201ENST00000516831 118 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 OR10D4P-201ENST00000525892 951 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AC126177.5-201ENST00000549599 178 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AC051619.2-201ENST00000559063 397 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.96□□□□□ -1.62
PTPN6P29350 RN7SL708P-201ENST00000580952 299 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 MIR4443-201ENST00000585052 53 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AC013244.1-201ENST00000604279 193 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AC007620.3-201ENST00000608131 497 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 AC136428.4-201ENST00000634254 1155 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 THAP12P5-201ENST00000405864 2275 ntBASIC4.96□□□□□ -1.62
PTPN6P29350 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.96□□□□□ -1.62
PTPN6P29350 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms