Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC233702.9-201ENST00000581528 203 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.25□□□□□ -1.57
CDH3P22223 SDR42E1P1-201ENST00000611327 477 ntBASIC5.25□□□□□ -1.57
CDH3P22223 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 AC020923.1-201ENST00000624021 917 ntBASIC5.25□□□□□ -1.57
CDH3P22223 AC074101.1-201ENST00000637861 241 ntBASIC5.25□□□□□ -1.57
CDH3P22223 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH3P22223 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH3P22223 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CDH3P22223 AC004817.4-201ENST00000602396 3625 ntBASIC5.25□□□□□ -1.57
CDH3P22223 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.25□□□□□ -1.57
CDH3P22223 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CDH3P22223 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CDH3P22223 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CDH3P22223 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 AL731532.2-201ENST00000623542 1953 ntBASIC5.24□□□□□ -1.57
CDH3P22223 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
CDH3P22223 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 RNU6-697P-201ENST00000363348 107 ntBASIC5.24□□□□□ -1.57
CDH3P22223 BMS1P3-201ENST00000372011 932 ntBASIC5.24□□□□□ -1.57
CDH3P22223 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH3P22223 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH3P22223 RNU6-152P-201ENST00000384037 107 ntBASIC5.24□□□□□ -1.57
CDH3P22223 AL133388.1-201ENST00000404509 287 ntBASIC5.24□□□□□ -1.57
CDH3P22223 AC013470.3-201ENST00000420252 1194 ntBASIC5.24□□□□□ -1.57
CDH3P22223 SRSF1P1-201ENST00000424058 520 ntBASIC5.24□□□□□ -1.57
CDH3P22223 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH3P22223 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.24□□□□□ -1.57
CDH3P22223 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH3P22223 AL672138.1-201ENST00000450604 1015 ntBASIC5.24□□□□□ -1.57
CDH3P22223 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 AC024558.1-201ENST00000505008 528 ntBASIC5.24□□□□□ -1.57
CDH3P22223 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH3P22223 CDC42P3-201ENST00000518493 633 ntBASIC5.24□□□□□ -1.57
CDH3P22223 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.24□□□□□ -1.57
CDH3P22223 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CDH3P22223 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH3P22223 NMNAT1P5-201ENST00000559657 841 ntBASIC5.24□□□□□ -1.57
CDH3P22223 RBM22P1-201ENST00000578589 1214 ntBASIC5.24□□□□□ -1.57
CDH3P22223 MIR3908-201ENST00000579798 126 ntBASIC5.24□□□□□ -1.57
CDH3P22223 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH3P22223 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 AC096553.1-201ENST00000605169 829 ntBASIC5.24□□□□□ -1.57
CDH3P22223 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 WBP1LP8-201ENST00000617401 327 ntBASIC5.24□□□□□ -1.57
CDH3P22223 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.24□□□□□ -1.57
CDH3P22223 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CDH3P22223 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CDH3P22223 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CDH3P22223 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH3P22223 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH3P22223 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
CDH3P22223 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH3P22223 AC112198.2-201ENST00000426589 6996 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AL731566.1-201ENST00000620490 1937 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC107027.3-201ENST00000565095 3473 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC003973.3-201ENST00000624863 2822 ntBASIC5.23□□□□□ -1.57
CDH3P22223 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CDH3P22223 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH3P22223 AC092681.1-201ENST00000297369 291 ntBASIC5.23□□□□□ -1.57
CDH3P22223 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH3P22223 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH3P22223 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH3P22223 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH3P22223 RNU6-171P-201ENST00000384354 107 ntBASIC5.23□□□□□ -1.57
CDH3P22223 SNORD56.6-201ENST00000384569 71 ntBASIC5.23□□□□□ -1.57
CDH3P22223 SNORA68.2-201ENST00000391263 128 ntBASIC5.23□□□□□ -1.57
CDH3P22223 RNA5SP487-201ENST00000410186 122 ntBASIC5.23□□□□□ -1.57
CDH3P22223 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH3P22223 SLC35E1P1-201ENST00000419313 864 ntBASIC5.23□□□□□ -1.57
CDH3P22223 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms