Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 VN1R81P-201ENST00000602085 372 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 AL445222.1-201ENST00000607259 628 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 BNIP3P41-202ENST00000616656 861 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.1□□□□□ -1.59
XRCC1P18887 MTCO1P1-201ENST00000624263 1081 ntBASIC5.1□□□□□ -1.59
XRCC1P18887 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.1□□□□□ -1.59
XRCC1P18887 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.09□□□□□ -1.59
XRCC1P18887 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.09□□□□□ -1.59
XRCC1P18887 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.09□□□□□ -1.59
XRCC1P18887 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 AC017079.1-201ENST00000333650 415 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 RN7SKP74-201ENST00000362849 309 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 UBBP2-201ENST00000376781 231 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 RNU1-106P-201ENST00000384382 164 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
XRCC1P18887 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.09□□□□□ -1.59
XRCC1P18887 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 RPL34P6-201ENST00000432390 345 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.09□□□□□ -1.59
XRCC1P18887 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 NOP56P2-201ENST00000447491 769 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 AC097484.1-201ENST00000471148 389 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.09□□□□□ -1.59
XRCC1P18887 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.09□□□□□ -1.59
XRCC1P18887 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.09□□□□□ -1.59
XRCC1P18887 MTND2P17-201ENST00000550281 688 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.09□□□□□ -1.59
XRCC1P18887 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.09□□□□□ -1.59
XRCC1P18887 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 AC008814.1-201ENST00000603797 406 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
XRCC1P18887 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.09□□□□□ -1.59
XRCC1P18887 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
XRCC1P18887 SMG1P4-204ENST00000523028 4131 ntBASIC5.09□□□□□ -1.59
XRCC1P18887 DDX18P6-201ENST00000450119 1997 ntBASIC5.09□□□□□ -1.6
XRCC1P18887 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.09□□□□□ -1.6
XRCC1P18887 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.09□□□□□ -1.6
XRCC1P18887 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 STX3-208ENST00000641815 3236 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
XRCC1P18887 SAMMSON-213ENST00000641336 1521 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.08□□□□□ -1.6
XRCC1P18887 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
XRCC1P18887 AP001642.1-201ENST00000624727 2117 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
XRCC1P18887 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
XRCC1P18887 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.08□□□□□ -1.6
XRCC1P18887 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
XRCC1P18887 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
XRCC1P18887 AL731566.1-201ENST00000620490 1937 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
XRCC1P18887 SNORA11B-201ENST00000408175 129 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 RNA5SP296-201ENST00000410523 111 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 AC016769.2-201ENST00000414815 475 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.08□□□□□ -1.6
XRCC1P18887 OR5M12P-201ENST00000423388 929 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 EI24P4-201ENST00000423683 1078 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
XRCC1P18887 CLUHP1-201ENST00000435012 1190 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.08□□□□□ -1.6
XRCC1P18887 RPS29P10-201ENST00000439197 166 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.08□□□□□ -1.6
XRCC1P18887 AC092647.2-201ENST00000452998 253 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 OR7L1P-201ENST00000456181 380 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 AC090114.3-201ENST00000479267 829 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 RPL7P41-201ENST00000485823 957 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 RN7SL97P-201ENST00000486780 299 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 RN7SL808P-201ENST00000496066 299 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.08□□□□□ -1.6
XRCC1P18887 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.08□□□□□ -1.6
XRCC1P18887 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 AC092490.3-201ENST00000545370 572 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.08□□□□□ -1.6
XRCC1P18887 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.08□□□□□ -1.6
XRCC1P18887 RNU6-84P-201ENST00000607737 102 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 AP000648.2-201ENST00000624182 404 ntBASIC5.08□□□□□ -1.6
XRCC1P18887 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
XRCC1P18887 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
XRCC1P18887 THAP12P4-201ENST00000528321 2266 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms