Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AC084759.1-201ENST00000561168 290 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFRAP16234 FAM106CP-201ENST00000582212 507 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AL121890.2-201ENST00000617644 465 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 AL133370.2-201ENST00000619934 439 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 AP001005.3-201ENST00000622049 129 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 MIR6719-201ENST00000622428 87 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFRAP16234 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AC119674.1-220ENST00000641502 1048 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFRAP16234 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFRAP16234 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PDGFRAP16234 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFRAP16234 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFRAP16234 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AC006210.2-201ENST00000367074 1545 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFRAP16234 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PDGFRAP16234 RNU6-1251P-201ENST00000364502 107 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 RNU1-43P-201ENST00000365052 165 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 RNA5SP223-201ENST00000365174 120 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 ST13P16-201ENST00000401760 781 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 DPPA2P3-201ENST00000411853 655 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 GLUD1P9-201ENST00000420997 1173 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.47□□□□□ -1.53
PDGFRAP16234 GAPDHP58-201ENST00000438477 1006 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 RPS29P10-201ENST00000439197 166 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 AL606490.8-201ENST00000441624 319 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 BUD31P2-201ENST00000449374 300 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 AL591363.1-201ENST00000450091 483 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 Z92846.1-201ENST00000456203 268 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 AC005532.2-201ENST00000467154 373 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 RN7SL222P-201ENST00000476452 299 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFRAP16234 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PDGFRAP16234 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.47□□□□□ -1.53
PDGFRAP16234 AC027308.1-201ENST00000517993 110 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFRAP16234 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFRAP16234 AC127381.1-201ENST00000555979 939 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFRAP16234 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFRAP16234 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 HMGB1P51-201ENST00000605166 638 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 AC084036.1-201ENST00000609190 508 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 AC009032.1-201ENST00000617574 431 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFRAP16234 AL139254.3-201ENST00000641097 674 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PDGFRAP16234 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFRAP16234 AC109780.1-201ENST00000451768 1344 ntBASIC5.47□□□□□ -1.53
PDGFRAP16234 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
PDGFRAP16234 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.47□□□□□ -1.53
PDGFRAP16234 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFRAP16234 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFRAP16234 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFRAP16234 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
PDGFRAP16234 HSPA8P14-201ENST00000552265 1805 ntBASIC5.46□□□□□ -1.53
PDGFRAP16234 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFRAP16234 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFRAP16234 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PDGFRAP16234 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PDGFRAP16234 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFRAP16234 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFRAP16234 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFRAP16234 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDGFRAP16234 U3.3-201ENST00000362986 216 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFRAP16234 RNU1-74P-201ENST00000384108 171 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 MT-RNR1-201ENST00000389680 954 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDGFRAP16234 RNU4-34P-201ENST00000410431 124 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.46□□□□□ -1.54
PDGFRAP16234 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFRAP16234 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFRAP16234 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFRAP16234 HMGB3P10-201ENST00000434734 572 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.46□□□□□ -1.54
PDGFRAP16234 RN7SL515P-201ENST00000463999 297 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 RPS18P6-201ENST00000476880 458 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 RN7SL727P-201ENST00000482164 296 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.46□□□□□ -1.54
PDGFRAP16234 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFRAP16234 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.46□□□□□ -1.54
PDGFRAP16234 AC026616.1-201ENST00000523157 525 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms