Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM1P09493 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM1P09493 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.5□□□□□ -1.53
TPM1P09493 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM1P09493 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TPM1P09493 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM1P09493 SALL4P2-201ENST00000423288 2910 ntBASIC5.5□□□□□ -1.53
TPM1P09493 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM1P09493 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM1P09493 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TPM1P09493 IL6STP1-201ENST00000346911 1020 ntBASIC5.5□□□□□ -1.53
TPM1P09493 SNORA73.1-201ENST00000363107 205 ntBASIC5.5□□□□□ -1.53
TPM1P09493 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.5□□□□□ -1.53
TPM1P09493 AL353625.1-202ENST00000366273 571 ntBASIC5.5□□□□□ -1.53
TPM1P09493 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TPM1P09493 MIR600-201ENST00000385007 98 ntBASIC5.5□□□□□ -1.53
TPM1P09493 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM1P09493 RN7SKP240-201ENST00000410583 375 ntBASIC5.5□□□□□ -1.53
TPM1P09493 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 RPS4XP16-201ENST00000427198 791 ntBASIC5.5□□□□□ -1.53
TPM1P09493 CYCSP6-201ENST00000434498 302 ntBASIC5.5□□□□□ -1.53
TPM1P09493 RPL36AP39-201ENST00000445859 318 ntBASIC5.5□□□□□ -1.53
TPM1P09493 AC073587.1-201ENST00000447093 876 ntBASIC5.5□□□□□ -1.53
TPM1P09493 RPEP1-201ENST00000504507 658 ntBASIC5.5□□□□□ -1.53
TPM1P09493 RPS4XP20-201ENST00000505751 772 ntBASIC5.5□□□□□ -1.53
TPM1P09493 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 RNU6-941P-201ENST00000516346 108 ntBASIC5.5□□□□□ -1.53
TPM1P09493 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 AC005868.1-201ENST00000536421 331 ntBASIC5.5□□□□□ -1.53
TPM1P09493 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TPM1P09493 MIR744-201ENST00000578242 98 ntBASIC5.5□□□□□ -1.53
TPM1P09493 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM1P09493 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.5□□□□□ -1.53
TPM1P09493 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM1P09493 AL121890.2-201ENST00000617644 465 ntBASIC5.5□□□□□ -1.53
TPM1P09493 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.5□□□□□ -1.53
TPM1P09493 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
TPM1P09493 CYP4F35P-202ENST00000636121 390 ntBASIC5.5□□□□□ -1.53
TPM1P09493 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.5□□□□□ -1.53
TPM1P09493 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM1P09493 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM1P09493 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
TPM1P09493 AL359922.3-201ENST00000624779 1670 ntBASIC5.5□□□□□ -1.53
TPM1P09493 DDX18P5-201ENST00000534547 1306 ntBASIC5.49□□□□□ -1.53
TPM1P09493 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.49□□□□□ -1.53
TPM1P09493 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TPM1P09493 AC092435.4-201ENST00000623012 4159 ntBASIC5.49□□□□□ -1.53
TPM1P09493 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TPM1P09493 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TPM1P09493 RNU6-729P-201ENST00000384399 107 ntBASIC5.49□□□□□ -1.53
TPM1P09493 RNA5SP284-201ENST00000384547 118 ntBASIC5.49□□□□□ -1.53
TPM1P09493 RNU1-77P-201ENST00000390868 162 ntBASIC5.49□□□□□ -1.53
TPM1P09493 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TPM1P09493 LYPLA1P3-201ENST00000402650 695 ntBASIC5.49□□□□□ -1.53
TPM1P09493 NUDT19P3-201ENST00000404698 555 ntBASIC5.49□□□□□ -1.53
TPM1P09493 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
TPM1P09493 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM1P09493 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM1P09493 AC092162.1-201ENST00000432828 434 ntBASIC5.49□□□□□ -1.53
TPM1P09493 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM1P09493 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.49□□□□□ -1.53
TPM1P09493 AL450263.2-201ENST00000439400 589 ntBASIC5.49□□□□□ -1.53
TPM1P09493 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM1P09493 AL591363.1-201ENST00000450091 483 ntBASIC5.49□□□□□ -1.53
TPM1P09493 RN7SL168P-201ENST00000463821 279 ntBASIC5.49□□□□□ -1.53
TPM1P09493 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM1P09493 RPL5P16-201ENST00000471467 790 ntBASIC5.49□□□□□ -1.53
TPM1P09493 SIAH1P1-201ENST00000479411 923 ntBASIC5.49□□□□□ -1.53
TPM1P09493 AGGF1P3-201ENST00000493675 1213 ntBASIC5.49□□□□□ -1.53
TPM1P09493 NANOGNBP2-201ENST00000544753 553 ntBASIC5.49□□□□□ -1.53
TPM1P09493 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM1P09493 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM1P09493 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM1P09493 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.49□□□□□ -1.53
TPM1P09493 AC087283.1-201ENST00000604029 1074 ntBASIC5.49□□□□□ -1.53
TPM1P09493 AC048341.3-201ENST00000619323 491 ntBASIC5.49□□□□□ -1.53
TPM1P09493 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TPM1P09493 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TPM1P09493 AC091305.2-201ENST00000624049 1576 ntBASIC5.49□□□□□ -1.53
TPM1P09493 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.49□□□□□ -1.53
TPM1P09493 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TPM1P09493 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 CASC19-206ENST00000641028 1430 ntBASIC5.48□□□□□ -1.53
TPM1P09493 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 AC093775.1-201ENST00000624154 1868 ntBASIC5.48□□□□□ -1.53
TPM1P09493 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TPM1P09493 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TPM1P09493 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms