Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL929601.4-201ENST00000613011 1341 ntBASIC5.75□□□□□ -1.49
MMP3P08254 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
MMP3P08254 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 AC073365.1-203ENST00000641055 1992 ntBASIC5.75□□□□□ -1.49
MMP3P08254 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
MMP3P08254 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 RN7SKP185-201ENST00000362813 326 ntBASIC5.75□□□□□ -1.49
MMP3P08254 RNU6-1331P-201ENST00000363658 106 ntBASIC5.75□□□□□ -1.49
MMP3P08254 RNU1-74P-201ENST00000384108 171 ntBASIC5.75□□□□□ -1.49
MMP3P08254 MIR589-201ENST00000385238 99 ntBASIC5.75□□□□□ -1.49
MMP3P08254 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
MMP3P08254 AL355143.1-201ENST00000407101 841 ntBASIC5.75□□□□□ -1.49
MMP3P08254 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.75□□□□□ -1.49
MMP3P08254 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.75□□□□□ -1.49
MMP3P08254 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.75□□□□□ -1.49
MMP3P08254 AL158053.1-201ENST00000441503 453 ntBASIC5.75□□□□□ -1.49
MMP3P08254 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.75□□□□□ -1.49
MMP3P08254 RN7SL189P-201ENST00000468631 289 ntBASIC5.75□□□□□ -1.49
MMP3P08254 AC006463.2-201ENST00000473326 348 ntBASIC5.75□□□□□ -1.49
MMP3P08254 AC104629.1-201ENST00000494226 508 ntBASIC5.75□□□□□ -1.49
MMP3P08254 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.75□□□□□ -1.49
MMP3P08254 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.75□□□□□ -1.49
MMP3P08254 AL671862.1-201ENST00000515851 349 ntBASIC5.75□□□□□ -1.49
MMP3P08254 RNA5SP43-201ENST00000516559 110 ntBASIC5.75□□□□□ -1.49
MMP3P08254 AC022360.1-201ENST00000521058 340 ntBASIC5.75□□□□□ -1.49
MMP3P08254 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.75□□□□□ -1.49
MMP3P08254 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.75□□□□□ -1.49
MMP3P08254 MIR4330-201ENST00000579077 105 ntBASIC5.75□□□□□ -1.49
MMP3P08254 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 AL031320.1-201ENST00000604177 357 ntBASIC5.75□□□□□ -1.49
MMP3P08254 uc_338.18-201ENST00000615451 175 ntBASIC5.75□□□□□ -1.49
MMP3P08254 MIR6810-201ENST00000622701 70 ntBASIC5.75□□□□□ -1.49
MMP3P08254 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.75□□□□□ -1.49
MMP3P08254 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
MMP3P08254 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 AC012618.3-205ENST00000637896 1496 ntBASIC5.75□□□□□ -1.49
MMP3P08254 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
MMP3P08254 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.74□□□□□ -1.49
MMP3P08254 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 DDX6P1-205ENST00000441966 1436 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.74□□□□□ -1.49
MMP3P08254 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
MMP3P08254 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 AC083837.1-201ENST00000565297 2994 ntBASIC5.74□□□□□ -1.49
MMP3P08254 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 AC132825.1-201ENST00000463573 2247 ntBASIC5.74□□□□□ -1.49
MMP3P08254 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.74□□□□□ -1.49
MMP3P08254 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
MMP3P08254 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.74□□□□□ -1.49
MMP3P08254 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 OR9G4-201ENST00000302957 984 ntBASIC5.74□□□□□ -1.49
MMP3P08254 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 RN7SKP153-201ENST00000365026 316 ntBASIC5.74□□□□□ -1.49
MMP3P08254 SNORA66-201ENST00000384792 133 ntBASIC5.74□□□□□ -1.49
MMP3P08254 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
MMP3P08254 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.74□□□□□ -1.49
MMP3P08254 PRPF38AP2-201ENST00000438179 851 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.74□□□□□ -1.49
MMP3P08254 CEACAMP9-201ENST00000442990 513 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.74□□□□□ -1.49
MMP3P08254 REG1CP-206ENST00000447469 496 ntBASIC5.74□□□□□ -1.49
MMP3P08254 EIF2S2P4-201ENST00000461070 984 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AC022133.1-201ENST00000490961 571 ntBASIC5.74□□□□□ -1.49
MMP3P08254 RN7SL244P-201ENST00000493405 297 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AC093890.1-201ENST00000502554 540 ntBASIC5.74□□□□□ -1.49
MMP3P08254 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MMP3P08254 OR51K1P-201ENST00000510214 950 ntBASIC5.74□□□□□ -1.49
MMP3P08254 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.74□□□□□ -1.49
MMP3P08254 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.74□□□□□ -1.49
MMP3P08254 OR7E10P-201ENST00000526420 991 ntBASIC5.74□□□□□ -1.49
MMP3P08254 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.74□□□□□ -1.49
MMP3P08254 GSTP1P1-201ENST00000548078 319 ntBASIC5.74□□□□□ -1.49
MMP3P08254 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.74□□□□□ -1.49
MMP3P08254 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.74□□□□□ -1.49
MMP3P08254 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.74□□□□□ -1.49
MMP3P08254 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.74□□□□□ -1.49
MMP3P08254 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.74□□□□□ -1.49
MMP3P08254 AC105254.2-201ENST00000603636 436 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AL671309.1-201ENST00000603750 544 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AC087283.1-201ENST00000604029 1074 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AC011626.1-201ENST00000604710 562 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.74□□□□□ -1.49
MMP3P08254 AL355802.4-201ENST00000607635 548 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AC084036.1-201ENST00000609190 508 ntBASIC5.74□□□□□ -1.49
MMP3P08254 AL355816.2-201ENST00000610049 647 ntBASIC5.74□□□□□ -1.49
MMP3P08254 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
MMP3P08254 AC105105.5-201ENST00000622635 1294 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms