Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.18□□□□□ -1.74
SDCBPO00560 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.18□□□□□ -1.74
SDCBPO00560 AC007225.2-201ENST00000562529 256 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 AC126915.2-201ENST00000610957 190 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 AL133268.1-201ENST00000405676 1401 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 CASC19-206ENST00000641028 1430 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.18□□□□□ -1.74
SDCBPO00560 DDX18P5-201ENST00000534547 1306 ntBASIC4.18□□□□□ -1.74
SDCBPO00560 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.18□□□□□ -1.74
SDCBPO00560 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SDCBPO00560 AC021242.1-201ENST00000507315 2035 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.17□□□□□ -1.74
SDCBPO00560 U3.2-201ENST00000362981 210 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 SNORA77-201ENST00000408716 125 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.17□□□□□ -1.74
SDCBPO00560 EIF4HP2-201ENST00000424380 563 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 FABP7P2-201ENST00000429946 379 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 OR52B5P-201ENST00000435337 951 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.17□□□□□ -1.74
SDCBPO00560 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.17□□□□□ -1.74
SDCBPO00560 FAR2P1-206ENST00000449736 709 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.17□□□□□ -1.74
SDCBPO00560 AC108751.2-201ENST00000469993 231 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 RPS26P24-201ENST00000497656 331 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 AC010350.1-201ENST00000504908 231 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.17□□□□□ -1.74
SDCBPO00560 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.17□□□□□ -1.74
SDCBPO00560 AC012339.2-201ENST00000523996 453 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 AC087477.6-201ENST00000559595 843 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.17□□□□□ -1.74
SDCBPO00560 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.17□□□□□ -1.74
SDCBPO00560 DPRXP4-201ENST00000578053 568 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 AC233702.9-201ENST00000581528 203 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 RNF138P2-201ENST00000603490 592 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 MIR6768-201ENST00000610734 72 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 AC099494.2-201ENST00000623371 978 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.17□□□□□ -1.74
SDCBPO00560 OR52B5P-202ENST00000641118 1110 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 AC009643.2-201ENST00000603543 1448 ntBASIC4.17□□□□□ -1.74
SDCBPO00560 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
SDCBPO00560 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.17□□□□□ -1.74
SDCBPO00560 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.17□□□□□ -1.74
SDCBPO00560 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SDCBPO00560 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SDCBPO00560 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.16□□□□□ -1.74
SDCBPO00560 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.16□□□□□ -1.74
SDCBPO00560 AC008549.2-201ENST00000333482 706 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SDCBPO00560 AL391361.1-201ENST00000405580 489 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 SNORA11.3-201ENST00000408471 128 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SDCBPO00560 RGS17P1-201ENST00000423358 553 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.16□□□□□ -1.74
SDCBPO00560 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.16□□□□□ -1.74
SDCBPO00560 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.16□□□□□ -1.74
SDCBPO00560 AC245047.2-201ENST00000441060 530 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 RN7SL172P-201ENST00000460535 303 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 RPS17P2-201ENST00000461663 408 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 RN7SL591P-201ENST00000496150 292 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.16□□□□□ -1.74
SDCBPO00560 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SDCBPO00560 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.16□□□□□ -1.74
SDCBPO00560 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.16□□□□□ -1.74
SDCBPO00560 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.16□□□□□ -1.74
SDCBPO00560 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.16□□□□□ -1.74
SDCBPO00560 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SDCBPO00560 AP002373.2-201ENST00000541631 1060 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.16□□□□□ -1.74
SDCBPO00560 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.16□□□□□ -1.74
SDCBPO00560 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 SNORA11.6-201ENST00000619030 128 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SDCBPO00560 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.16□□□□□ -1.74
SDCBPO00560 SCN1A-220ENST00000641603 12506 ntBASIC4.16□□□□□ -1.74
SDCBPO00560 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SDCBPO00560 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SDCBPO00560 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SDCBPO00560 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SDCBPO00560 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SDCBPO00560 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SDCBPO00560 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms