Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC008536.2-201ENST00000607284 349 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AP001506.1-201ENST00000615444 211 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AC136475.10-201ENST00000620253 385 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AL359880.1-201ENST00000621879 266 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AC211433.3-201ENST00000623770 375 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AC017104.4-201ENST00000636283 1592 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AC006511.3-201ENST00000624929 1783 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AKAP17BP-201ENST00000431706 2719 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHISA3A0PJX4 FOLH1B-202ENST00000529567 2145 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 AC137056.2-201ENST00000624055 1958 ntBASIC5.95□□□□□ -1.46
SHISA3A0PJX4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 CASC19-280ENST00000642102 1351 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC093311.1-201ENST00000506586 2021 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC110373.1-201ENST00000505994 3505 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 CUBNP3-201ENST00000457461 1784 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 SNX18P3-202ENST00000565670 1750 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 RNA5SP301-201ENST00000362537 121 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 Y_RNA.38-201ENST00000362617 102 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 Y_RNA.296-201ENST00000364930 108 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 MT-TD-201ENST00000387419 68 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 MTCO3P40-201ENST00000392516 676 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC025750.1-201ENST00000399891 379 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AL512422.1-201ENST00000407033 553 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 RN7SKP148-201ENST00000410179 275 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 RNA5SP115-201ENST00000411160 107 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 HMGB1P11-201ENST00000413899 637 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC005033.1-201ENST00000428904 813 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 FDPSP8-201ENST00000438304 1089 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC073614.1-201ENST00000438690 650 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC009237.4-201ENST00000441078 238 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 RPL18AP17-201ENST00000455326 198 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 RN7SL58P-201ENST00000473445 294 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 CHCHD2P7-201ENST00000508008 452 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 RNA5SP116-201ENST00000516132 98 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 RNU6-358P-201ENST00000516564 75 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 IGHV3-57-201ENST00000520143 280 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 NXPE2P1-201ENST00000543705 726 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC008126.1-201ENST00000549019 480 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC023310.2-201ENST00000553844 547 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 ANP32BP3-201ENST00000559213 706 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 PRR13P5-201ENST00000596581 442 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC007262.1-201ENST00000604099 321 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AL049634.3-201ENST00000604968 457 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC069304.2-201ENST00000605154 435 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AC018690.1-201ENST00000608144 626 ntBASIC5.94□□□□□ -1.46
SHISA3A0PJX4 AL590282.1-201ENST00000610379 1136 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms