Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC106872.5-201ENST00000508856 1416 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 RNU1-146P-201ENST00000364015 165 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 RN7SKP292-201ENST00000365522 317 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC092642.1-201ENST00000392417 425 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 OR7E101P-201ENST00000400428 513 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 RPS3AP2-201ENST00000407190 754 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 MTATP6P20-201ENST00000414147 562 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AL596448.1-201ENST00000415024 392 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 MTND4P3-201ENST00000417829 541 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 USP12PY-201ENST00000427677 1064 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC126120.1-201ENST00000431082 470 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 PTGES3P1-201ENST00000439531 483 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AL445665.1-202ENST00000452436 324 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 RANP1-206ENST00000455094 651 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 CDC42P1-201ENST00000456658 548 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 PPIAP19-201ENST00000486414 492 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC079203.1-201ENST00000487972 404 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC104109.1-201ENST00000498563 436 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC034205.1-201ENST00000520621 638 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC124293.1-201ENST00000530034 493 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC027455.1-201ENST00000574104 594 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC090312.2-201ENST00000582687 378 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 PART1_2.1-201ENST00000612397 250 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC127024.6-201ENST00000621598 424 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC104985.3-201ENST00000623479 597 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 SNX18P3-202ENST00000565670 1750 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 AC015689.2-201ENST00000528172 1738 ntBASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
COL4A3BPQ9Y5P4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
COL4A3BPQ9Y5P4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AL359955.1-201ENST00000455242 3275 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 SNORA17A-201ENST00000391185 133 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 NPM1P40-201ENST00000412758 733 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC113412.1-201ENST00000425840 504 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AL590399.2-201ENST00000427536 309 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 KRT8P51-201ENST00000438938 274 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC009263.1-201ENST00000441193 1239 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC023141.8-201ENST00000442554 208 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 RSU1P1-201ENST00000453416 441 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC005229.2-201ENST00000456995 399 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 NXT1P1-201ENST00000458481 316 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 RNU6-1218P-201ENST00000458990 108 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 snoU13.29-201ENST00000459370 104 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 RPL7AP10-201ENST00000481016 791 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC099521.1-201ENST00000482557 334 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC005912.1-201ENST00000495392 255 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 RPL21P131-201ENST00000497298 483 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC010285.3-201ENST00000511668 676 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC010306.1-201ENST00000523223 1117 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC090424.1-201ENST00000535243 736 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AC009948.4-201ENST00000604692 675 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms