Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SALL4Q9UJQ4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.03□□□□□ -1.28
SALL4Q9UJQ4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.03□□□□□ -1.28
SALL4Q9UJQ4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SALL4Q9UJQ4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SALL4Q9UJQ4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.03□□□□□ -1.28
SALL4Q9UJQ4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.03□□□□□ -1.28
SALL4Q9UJQ4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.02□□□□□ -1.28
SALL4Q9UJQ4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
SALL4Q9UJQ4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 MTCO1P23-201ENST00000415223 1526 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 CR383658.2-201ENST00000547576 1525 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 PABPC1P9-201ENST00000426076 1612 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC078880.4-201ENST00000617627 1749 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 Y_RNA.61-201ENST00000362835 102 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 MIR99A-201ENST00000384906 81 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 MIR187-201ENST00000385062 109 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 RNA5SP474-201ENST00000391234 90 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 RN7SKP59-201ENST00000410520 314 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 RPL7P30-201ENST00000420888 709 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC009480.2-201ENST00000422916 432 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 TRIM60P10Y-201ENST00000425589 751 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 RPL31P54-201ENST00000429803 370 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 TRIM60P8Y-201ENST00000436338 762 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 UBE2V1P3-201ENST00000439651 417 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 TPT1P14-201ENST00000448018 505 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 KLF3P2-201ENST00000465138 268 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 RN7SL216P-201ENST00000471607 298 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 RN7SL790P-201ENST00000474043 298 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 FAM92A1P2-202ENST00000504766 877 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC138409.2-202ENST00000507274 458 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 CARSP2-201ENST00000520688 277 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC135983.3-201ENST00000528049 1226 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 GTF2IP22-201ENST00000554443 182 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 PCMTD1P2-201ENST00000565017 355 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AL135999.3-201ENST00000610501 812 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC006338.1-201ENST00000618453 749 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC004009.2-201ENST00000623016 728 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC061999.1-201ENST00000624454 177 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AC140479.4-205ENST00000636339 820 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 OR2A3P-202ENST00000641249 1776 ntBASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SALL4Q9UJQ4 AL354685.2-201ENST00000448218 1447 ntBASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 AC093297.3-201ENST00000607056 2517 ntBASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 RNU6-374P-201ENST00000364146 108 ntBASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SALL4Q9UJQ4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms