Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 RNU1-6P-201ENST00000516290 144 ntBASIC6.25□□□□□ -1.41
SCN11AQ9UI33 RN7SKP21-201ENST00000516503 220 ntBASIC6.25□□□□□ -1.41
SCN11AQ9UI33 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 AC011944.2-201ENST00000624440 683 ntBASIC6.25□□□□□ -1.41
SCN11AQ9UI33 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.25□□□□□ -1.41
SCN11AQ9UI33 OR56B2P-202ENST00000641377 2453 ntBASIC6.25□□□□□ -1.41
SCN11AQ9UI33 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 RPL17P36-201ENST00000420302 549 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AC111000.3-201ENST00000508057 576 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AC026688.1-201ENST00000520639 1168 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 TOMM20P2-201ENST00000540082 421 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AC115286.1-201ENST00000604298 434 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 Z95327.3-201ENST00000610385 572 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AC243960.7-201ENST00000623532 707 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AC021106.3-201ENST00000623925 531 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 ABCC13-202ENST00000463099 3842 ntBASIC6.24□□□□□ -1.41
SCN11AQ9UI33 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SCN11AQ9UI33 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 MIR129-1-201ENST00000384972 72 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 COX5BP7-201ENST00000414780 274 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC004980.3-201ENST00000447046 365 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC073358.1-201ENST00000505671 684 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC136624.4-201ENST00000573044 370 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC103792.1-201ENST00000603591 919 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC004232.3-201ENST00000622977 525 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC100871.1-201ENST00000507871 1456 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC007159.1-201ENST00000566529 4706 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 GTF2IP2-201ENST00000424290 697 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 RNA5SP116-201ENST00000516132 98 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AL049794.2-201ENST00000616301 365 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 AC068724.3-201ENST00000625906 87 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 OR52H1-202ENST00000641796 1061 ntBASIC6.23□□□□□ -1.41
SCN11AQ9UI33 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SCN11AQ9UI33 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 RN7SKP267-201ENST00000410381 285 ntBASIC6.22□□□□□ -1.41
SCN11AQ9UI33 LINC00993-201ENST00000420453 540 ntBASIC6.22□□□□□ -1.41
SCN11AQ9UI33 YWHAZP2-201ENST00000440317 728 ntBASIC6.22□□□□□ -1.41
SCN11AQ9UI33 AC093824.1-201ENST00000508796 343 ntBASIC6.22□□□□□ -1.41
SCN11AQ9UI33 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 GTF2IP11-201ENST00000526931 420 ntBASIC6.22□□□□□ -1.41
SCN11AQ9UI33 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms