Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC103563.5-201ENST00000455643 364 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC079841.1-201ENST00000481228 950 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC092989.1-201ENST00000481235 277 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 RPS4XP15-201ENST00000489210 795 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 OR52H2P-201ENST00000514607 902 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AP003080.1-202ENST00000526526 915 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC009729.1-201ENST00000548873 1133 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 PSMB7P1-201ENST00000556349 514 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC121758.1-202ENST00000556917 658 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 OR4H6P-201ENST00000563771 921 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 AL117336.2-201ENST00000602435 335 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC005034.5-201ENST00000604219 466 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC098614.4-201ENST00000607601 462 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AL121757.2-201ENST00000611223 313 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 Y_RNA.804-201ENST00000615262 101 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 AP005264.7-201ENST00000625003 745 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 AC135068.11-201ENST00000636378 921 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 MIR3688-2-201ENST00000636963 87 ntBASIC6.52□□□□□ -1.37
SSU72Q9NP77 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSU72Q9NP77 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.52□□□□□ -1.37
SSU72Q9NP77 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 ZNF101P1-201ENST00000435701 1720 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL035467.1-201ENST00000403583 686 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL359092.1-201ENST00000417156 265 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 HSPE1P16-201ENST00000426640 348 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL050321.1-201ENST00000432363 400 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC079922.1-201ENST00000443291 359 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 TRIM60P16-201ENST00000444048 694 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL118496.2-201ENST00000448300 230 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 COX6CP18-201ENST00000448769 222 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL355032.1-201ENST00000472981 438 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 RPL34P33-201ENST00000486062 334 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC069439.1-201ENST00000494739 167 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC108941.1-201ENST00000502853 530 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 RNU6-1225P-201ENST00000516336 65 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 SNRPCP6-201ENST00000528310 210 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 HIGD1AP9-201ENST00000550710 279 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 FRG2IP-201ENST00000563581 781 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 RN7SL689P-201ENST00000577215 297 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 AL589765.5-201ENST00000596133 515 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.51□□□□□ -1.37
SSU72Q9NP77 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSU72Q9NP77 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SSU72Q9NP77 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms