Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 RNU1-108P-201ENST00000362556 161 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 RNA5SP284-201ENST00000384547 118 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AL356968.2-201ENST00000412769 1257 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 TNPO1P1-201ENST00000423641 1138 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 COX6CP13-201ENST00000428703 226 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AL161722.2-201ENST00000434731 981 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC091180.1-201ENST00000462104 372 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC007998.1-201ENST00000474156 672 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 RN7SL41P-201ENST00000476144 297 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 NIP7P2-201ENST00000485801 544 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 HMGB1P44-201ENST00000508597 572 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC078878.1-201ENST00000539832 958 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AL162431.4-201ENST00000604674 411 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AL359742.1-201ENST00000622497 540 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 AL512356.3-201ENST00000623005 461 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 KPNA2P2-201ENST00000419546 1489 ntBASIC4.56□□□□□ -1.68
HMG20AQ9NP66 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMG20AQ9NP66 IRF5P1-201ENST00000504852 2164 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 RNU1-20P-201ENST00000363314 162 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 SDHDP6-201ENST00000414693 480 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 IPPKP1-201ENST00000422501 768 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 EIF4HP2-201ENST00000424380 563 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 GAPDHP34-201ENST00000432112 823 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 RPL23AP19-201ENST00000436229 369 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC064862.4-201ENST00000442180 334 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AL035090.1-201ENST00000454835 332 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC108161.1-201ENST00000461060 402 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC022826.1-201ENST00000519383 805 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC116553.2-201ENST00000564203 463 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC005341.1-201ENST00000571086 708 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 MIR4505-201ENST00000582238 73 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AL133406.3-201ENST00000606817 541 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AL137246.1-201ENST00000607072 977 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC004232.3-201ENST00000622977 525 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC005086.4-201ENST00000623065 213 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 AC017104.4-201ENST00000636283 1592 ntBASIC4.55□□□□□ -1.68
HMG20AQ9NP66 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HMG20AQ9NP66 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMG20AQ9NP66 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.54□□□□□ -1.68
HMG20AQ9NP66 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.54□□□□□ -1.68
HMG20AQ9NP66 HCFC2P1-201ENST00000392864 1592 ntBASIC4.54□□□□□ -1.68
HMG20AQ9NP66 RNA5SP510-201ENST00000364697 99 ntBASIC4.54□□□□□ -1.68
HMG20AQ9NP66 SNORA16A-201ENST00000384342 137 ntBASIC4.54□□□□□ -1.68
HMG20AQ9NP66 AL160275.2-201ENST00000412010 394 ntBASIC4.54□□□□□ -1.68
HMG20AQ9NP66 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.54□□□□□ -1.68
HMG20AQ9NP66 SRSF1P1-201ENST00000424058 520 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms