Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 MIR4489-201ENST00000578869 62 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 EIF1P5-201ENST00000585002 234 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 AC079880.2-201ENST00000603790 1213 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 AP004372.1-201ENST00000604842 844 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 AC005021.1-201ENST00000608730 355 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 DUXAP10-204ENST00000612052 616 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 AC140725.3-201ENST00000616193 880 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 CU639417.4-201ENST00000623928 207 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 AC126544.2-201ENST00000625174 749 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 AP001029.2-203ENST00000589795 4910 ntBASIC5.74□□□□□ -1.49
USP29Q9HBJ7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.74□□□□□ -1.49
USP29Q9HBJ7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 RNA5SP394-201ENST00000364216 119 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL009179.1-201ENST00000406085 265 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 DPPA2P2-201ENST00000418220 897 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC110749.1-201ENST00000462007 357 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC008410.1-201ENST00000483777 339 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC108693.1-201ENST00000496068 432 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC021087.2-201ENST00000504656 1203 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC138832.1-201ENST00000522871 556 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC079064.1-201ENST00000528365 362 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 HMGB1P42-201ENST00000532126 553 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL359219.2-201ENST00000555184 348 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC008507.2-201ENST00000588402 1176 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC010503.3-201ENST00000594355 540 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 SDR42E1P1-201ENST00000611327 477 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 RMST_5.1-201ENST00000618704 126 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL133370.2-201ENST00000619934 439 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL356863.1-201ENST00000623378 1080 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC093875.1-201ENST00000623688 504 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL078595.3-201ENST00000623815 1166 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC011503.2-201ENST00000594230 1500 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AL356317.1-201ENST00000396110 1436 ntBASIC5.73□□□□□ -1.49
USP29Q9HBJ7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP29Q9HBJ7 AC245100.2-201ENST00000454544 1679 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AC003985.2-201ENST00000562268 1669 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AL359715.3-201ENST00000569267 2123 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 LINC01963-201ENST00000562038 3148 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 RNA5SP131-201ENST00000365452 119 ntBASIC5.72□□□□□ -1.49
USP29Q9HBJ7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP29Q9HBJ7 U3.28-201ENST00000391249 210 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms