Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 RNVU1-6-201ENST00000364688 164 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 HMGB3P7-201ENST00000400214 611 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 RPA2P2-201ENST00000419698 796 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AC004074.1-201ENST00000421810 1063 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 USP9YP9-201ENST00000429406 715 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AL691482.1-201ENST00000453255 87 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 RN7SL441P-201ENST00000492388 296 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 RNA5SP228-201ENST00000516232 133 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 RNU6-964P-201ENST00000516524 69 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AC137768.1-201ENST00000549998 553 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AL512310.9-201ENST00000553311 948 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 MIR3667-201ENST00000581025 74 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 PRPF19P1-201ENST00000584766 898 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AC020910.3-201ENST00000603701 874 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 AL139041.1-201ENST00000605480 610 ntBASIC5.4□□□□□ -1.54
NXF3Q9H4D5 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 AC005261.6-201ENST00000623072 1387 ntBASIC5.4□□□□□ -1.55
NXF3Q9H4D5 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NXF3Q9H4D5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC125336.1-201ENST00000508893 2827 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 ECM1P2-201ENST00000503354 1577 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 LRRC37BP1-201ENST00000398851 714 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 GTF2IP5-201ENST00000414608 731 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AL450023.3-201ENST00000440592 271 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 RPL7AP61-201ENST00000443410 636 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC004980.3-201ENST00000447046 365 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC090602.1-201ENST00000469695 252 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC002456.2-201ENST00000509356 380 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC016559.2-201ENST00000510759 359 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 RNA5SP392-201ENST00000516905 112 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 NDUFB4P11-201ENST00000560510 395 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 UBE2FP2-201ENST00000566646 462 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC027216.1-201ENST00000577726 685 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC087283.1-201ENST00000604029 1074 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AP001521.2-201ENST00000608772 546 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC087821.1-201ENST00000623639 567 ntBASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
NXF3Q9H4D5 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.38□□□□□ -1.55
NXF3Q9H4D5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
NXF3Q9H4D5 AP001029.2-203ENST00000589795 4910 ntBASIC5.38□□□□□ -1.55
NXF3Q9H4D5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.38□□□□□ -1.55
NXF3Q9H4D5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NXF3Q9H4D5 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NXF3Q9H4D5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NXF3Q9H4D5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NXF3Q9H4D5 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NXF3Q9H4D5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 420.1 ms