Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 NANOGP9-201ENST00000439890 892 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 Z77249.1-201ENST00000444622 1175 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 FRG2FP-204ENST00000453982 852 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC104339.1-201ENST00000465478 348 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC006539.1-201ENST00000481419 501 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 RN7SL57P-201ENST00000493687 290 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 RN7SL649P-201ENST00000496974 275 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 LSM3P4-201ENST00000502948 309 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC093534.1-201ENST00000504977 132 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC011853.1-201ENST00000518911 454 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC006518.2-201ENST00000542513 940 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC006512.2-201ENST00000543250 486 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC025260.1-201ENST00000548858 430 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 MIR4260-201ENST00000583107 67 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 NANOGP3-201ENST00000605855 286 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC097065.2-201ENST00000608159 533 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 MIR6793-201ENST00000612376 63 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC123767.1-202ENST00000620407 817 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC138907.10-201ENST00000623708 983 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 AC090897.3-201ENST00000636973 1157 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 MTND2P41-201ENST00000637599 773 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 CIR1P2-201ENST00000514821 1342 ntBASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM54Q9BYV2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM54Q9BYV2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM54Q9BYV2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.71□□□□□ -1.49
TRIM54Q9BYV2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.71□□□□□ -1.49
TRIM54Q9BYV2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM54Q9BYV2 AC073055.1-201ENST00000456901 1621 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 RNU4-68P-201ENST00000364314 141 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 RNU6-224P-201ENST00000384055 107 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 OOSP1-201ENST00000398992 1270 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC069154.1-201ENST00000432914 542 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC007679.3-201ENST00000434035 414 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC099670.2-201ENST00000435130 321 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 MTCO2P20-201ENST00000437339 673 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 RPS12P17-201ENST00000438591 377 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 GLUD1P3-202ENST00000508551 200 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC126615.2-201ENST00000553003 515 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC090888.2-201ENST00000559765 1144 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 RBM22P1-201ENST00000578589 1214 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 CCDC58P3-201ENST00000590792 430 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC009779.8-202ENST00000607990 932 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC108673.3-201ENST00000609183 335 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 MIR6809-201ENST00000612189 116 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC022400.9-201ENST00000623633 273 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC129778.1-202ENST00000623812 261 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AL591379.1-207ENST00000635982 261 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AC073869.7-201ENST00000640874 297 ntBASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TRIM54Q9BYV2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms