Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CPNE2Q96FN4 AC104118.1-201ENST00000607625 1589 ntBASIC4.4□□□□□ -1.71
CPNE2Q96FN4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CPNE2Q96FN4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CPNE2Q96FN4 AL672167.1-205ENST00000641112 3080 ntBASIC4.4□□□□□ -1.71
CPNE2Q96FN4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 U3.3-201ENST00000362986 216 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AL672167.2-201ENST00000377164 879 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 SNORA2.3-201ENST00000383920 135 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 GAPDHP15-201ENST00000398586 975 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 KCTD9P1-201ENST00000430462 1167 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AL390119.1-201ENST00000440329 312 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 CYCSP34-201ENST00000458172 304 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 RPL7P39-201ENST00000481157 744 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 RN7SL741P-201ENST00000482473 289 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 RPEP1-201ENST00000504507 658 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 UGT2A3P7-201ENST00000510485 734 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AC027308.1-201ENST00000517993 110 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 RPL23AP53-201ENST00000521854 457 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AC090022.1-201ENST00000546569 311 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 SUGT1P3-202ENST00000604259 383 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AC104695.2-201ENST00000605056 775 ntBASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CPNE2Q96FN4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 RNU6-729P-201ENST00000384399 107 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 MIR600-201ENST00000385007 98 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 LYPLA1P3-201ENST00000402650 695 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 RN7SKP125-201ENST00000410481 302 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 RPS4XP16-201ENST00000427198 791 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 CYCSP12-201ENST00000437729 300 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 SNRPFP2-201ENST00000440710 251 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC239798.3-201ENST00000454459 408 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 RANP1-206ENST00000455094 651 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 NIP7P2-201ENST00000485801 544 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 RN7SKP260-201ENST00000516907 149 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC024940.3-201ENST00000538551 316 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC087783.2-201ENST00000605070 562 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 MIR6837-201ENST00000620884 64 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC091305.2-201ENST00000624049 1576 ntBASIC4.38□□□□□ -1.71
CPNE2Q96FN4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.38□□□□□ -1.71
CPNE2Q96FN4 KARSP1-201ENST00000451871 1752 ntBASIC4.37□□□□□ -1.71
CPNE2Q96FN4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CPNE2Q96FN4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.37□□□□□ -1.71
CPNE2Q96FN4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.37□□□□□ -1.71
CPNE2Q96FN4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CPNE2Q96FN4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms