Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL158062.1-201ENST00000619632 745 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC013470.4-201ENST00000619978 986 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 AC026422.1-201ENST00000623961 452 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 WDR95P-201ENST00000425638 1542 ntBASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CTHRC1Q96CG8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC009962.1-201ENST00000567327 3813 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AL159987.1-201ENST00000347911 293 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 U3.10-201ENST00000364459 214 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 MIR130A-201ENST00000385274 89 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AL136310.1-201ENST00000404926 654 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 RPS3AP2-201ENST00000407190 754 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC010385.1-201ENST00000412374 256 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 RPL23AP19-201ENST00000436229 369 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC073109.1-201ENST00000445066 978 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 RPL5P23-201ENST00000496040 868 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 SCARNA6.1-201ENST00000516989 238 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 IGKV2-19-201ENST00000518132 283 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 IGHV3-63-201ENST00000518422 341 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 OSBPL9P5-201ENST00000542581 171 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC023050.2-201ENST00000544968 387 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 MIR3614-201ENST00000581261 86 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC061975.8-201ENST00000587058 721 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 VN1R78P-201ENST00000597393 564 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC021171.1-201ENST00000603137 706 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AC093388.1-201ENST00000609166 430 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 AL035661.1-201ENST00000620459 1144 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 BX649567.1-201ENST00000642071 1134 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 Z95114.1-201ENST00000624264 14574 ntBASIC5.36□□□□□ -1.55
CTHRC1Q96CG8 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC091305.2-201ENST00000624049 1576 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 RNA5SP27-201ENST00000363839 119 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 RNU1-136P-201ENST00000384181 164 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 MT-TP-201ENST00000387461 68 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 U3.23-201ENST00000391132 200 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AL022331.1-201ENST00000429025 477 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 RPL34P26-201ENST00000445636 354 ntBASIC5.35□□□□□ -1.55
CTHRC1Q96CG8 Z99714.1-201ENST00000450463 807 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms