Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AP000676.2-201ENST00000529711 301 ntBASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 MIR4691-201ENST00000583764 85 ntBASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AP005432.2-201ENST00000608162 586 ntBASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AL627230.1-201ENST00000613077 211 ntBASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AL591926.8-201ENST00000616876 211 ntBASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 THAP12P5-201ENST00000405864 2275 ntBASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
FNDC9Q8TBE3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 RNA5SP123-201ENST00000363244 119 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 SNORA66-201ENST00000384792 133 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AL390316.1-201ENST00000406279 553 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 NPM1P40-201ENST00000412758 733 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 RPL12P9-201ENST00000412942 488 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 VN1R54P-201ENST00000435210 1049 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 RHOT1P3-201ENST00000436571 331 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 RPL34P20-201ENST00000442771 351 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AL645937.3-201ENST00000453647 936 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 RN7SL244P-201ENST00000493405 297 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 RPL37AP8-201ENST00000494116 276 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 NDUFB5P1-201ENST00000508134 564 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 COX6B1P5-201ENST00000509843 249 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AP002884.5-201ENST00000595053 1132 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC105254.2-201ENST00000603636 436 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC024940.4-201ENST00000605507 246 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
FNDC9Q8TBE3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 PCAT14-202ENST00000627127 3935 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AC004817.4-201ENST00000602396 3625 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 MIR550A3-201ENST00000390735 95 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AL109941.1-201ENST00000401925 229 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AL078599.1-201ENST00000402075 293 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AL590762.4-201ENST00000425885 253 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 BX323845.1-201ENST00000432417 179 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 CYCSP24-201ENST00000445119 316 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 BX842559.2-201ENST00000451418 605 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AC091180.1-201ENST00000462104 372 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AC010350.1-201ENST00000504908 231 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 AC100784.1-201ENST00000522790 310 ntBASIC4.54□□□□□ -1.68
FNDC9Q8TBE3 OR7E128P-201ENST00000532736 1024 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms