Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RN7SL570P-201ENST00000484405 292 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AC005412.2-201ENST00000492004 341 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AC093534.1-201ENST00000504977 132 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 MORF4L1P3-201ENST00000525966 950 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 OR6M2P-201ENST00000529831 871 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AP001160.4-201ENST00000596971 382 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AC012616.1-201ENST00000600294 197 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AL022067.1-201ENST00000602426 454 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AC009159.2-201ENST00000617603 606 ntBASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SMC1BQ8NDV3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC068769.1-201ENST00000474767 2426 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 BX284613.1-201ENST00000452221 1641 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC079298.1-201ENST00000625026 1619 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RN7SKP74-201ENST00000362849 309 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RNU6-207P-201ENST00000384137 107 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RNA5SP339-201ENST00000390987 122 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC008173.1-201ENST00000418901 264 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RPL17P36-201ENST00000420302 549 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 DSTNP5-201ENST00000427921 523 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RPS7P2-201ENST00000435134 607 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 MED6P1-201ENST00000439659 713 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AL663074.2-201ENST00000440621 479 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AL353898.1-201ENST00000444055 238 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RPS27P5-201ENST00000444247 244 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC239367.2-201ENST00000447309 705 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 VDAC2P4-201ENST00000452925 711 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RPL21P18-201ENST00000469899 480 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC096741.1-201ENST00000472250 846 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RN7SKP147-201ENST00000517154 244 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AL132857.1-201ENST00000555180 708 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC209154.1-201ENST00000582156 337 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC099785.1-201ENST00000605697 437 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC097065.2-201ENST00000608159 533 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC068057.2-201ENST00000624047 895 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AP000676.4-201ENST00000624659 623 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SMC1BQ8NDV3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 NCOA4P2-201ENST00000340589 1813 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 ZNF29P-201ENST00000225587 168 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 RNU6-252P-201ENST00000363232 107 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 RNA5SP211-201ENST00000365516 117 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms