Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 AC114947.2-201ENST00000565748 2125 ntBASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC65Q8IXS2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 RN7SKP269-201ENST00000365545 319 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 RNU6-171P-201ENST00000384354 107 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AC092642.1-201ENST00000392417 425 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 U3.36-201ENST00000408418 213 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AC013429.2-201ENST00000418798 781 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AL355433.1-201ENST00000422804 300 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 BX323845.1-201ENST00000432417 179 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 ARAFP2-201ENST00000440565 559 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AL136455.1-201ENST00000441083 1240 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 RPL7AP61-201ENST00000443410 636 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 KNOP1P3-201ENST00000446933 426 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 MRPL35P2-201ENST00000448009 511 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AL591363.1-201ENST00000450091 483 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AURKAPS1-201ENST00000451805 1212 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AC092647.2-201ENST00000452998 253 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 RPS26P39-201ENST00000469206 341 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 RN7SL222P-201ENST00000476452 299 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 RPS18P6-201ENST00000476880 458 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 LSM3P2-201ENST00000551246 273 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 OR11J2P-201ENST00000555298 907 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 AL390726.5-202ENST00000564800 256 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 MIR6826-201ENST00000617808 98 ntBASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC65Q8IXS2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC073136.1-201ENST00000449426 2884 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 NPM1P40-201ENST00000412758 733 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC104333.2-201ENST00000422630 192 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 TMX2P1-201ENST00000436507 708 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 TXNP5-201ENST00000441043 315 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AL354714.3-201ENST00000447284 493 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC105031.1-201ENST00000518550 476 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC022832.1-201ENST00000530718 645 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC011447.4-201ENST00000587562 111 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AL121890.2-201ENST00000617644 465 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 MIR6886-201ENST00000619864 61 ntBASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC65Q8IXS2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC65Q8IXS2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms