Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC104966.1-201ENST00000467010 1464 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 CASC19-206ENST00000641028 1430 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 OR56B2P-201ENST00000317102 954 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 RN7SKP121-201ENST00000410842 305 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC012519.1-201ENST00000424588 610 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 HSPE1P16-201ENST00000426640 348 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC093716.1-201ENST00000435923 377 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 OR3D1P-201ENST00000438288 955 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 RPL23AP76-201ENST00000441860 458 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 HIGD1AP16-201ENST00000450986 258 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC104090.1-201ENST00000506341 1171 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC109927.2-201ENST00000506416 303 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC108120.2-201ENST00000512973 294 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 SETP21-201ENST00000514799 892 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AP000619.3-201ENST00000535634 1127 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 PCNPP1-201ENST00000552501 511 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 BLZF2P-201ENST00000553776 1130 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC006530.1-201ENST00000555980 571 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC116553.2-201ENST00000564203 463 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 VN1R88P-201ENST00000596787 292 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC073648.5-201ENST00000603502 305 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AC124916.2-201ENST00000604416 224 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AL499605.1-201ENST00000604628 403 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 MIR6778-201ENST00000617912 73 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM48Q8IWZ4 AP000776.1-201ENST00000530032 1663 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RNU6-1200P-201ENST00000384162 107 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AL035419.1-201ENST00000397037 564 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AL031577.2-201ENST00000404133 280 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RN7SKP273-201ENST00000411392 314 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RAD23BP2-201ENST00000416003 1207 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 P2RY10P2-201ENST00000416730 913 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AL133325.1-201ENST00000421090 382 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC115283.1-201ENST00000427353 400 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RPSAP65-201ENST00000429660 595 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 ATP5F1P1-201ENST00000433775 569 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AMYP1-201ENST00000440059 1023 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 MORF4-201ENST00000447135 971 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 CALM1P2-201ENST00000452941 448 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 RANP2-201ENST00000456833 229 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 SRRM1P2-201ENST00000464531 1192 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC091965.2-201ENST00000512324 613 ntBASIC6.1□□□□□ -1.43
TRIM48Q8IWZ4 AC008837.2-201ENST00000513076 418 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms