Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC137056.2-201ENST00000624055 1958 ntBASIC6.15□□□□□ -1.43
ATG4DQ86TL0 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.15□□□□□ -1.43
ATG4DQ86TL0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.15□□□□□ -1.43
ATG4DQ86TL0 CCT4P2-201ENST00000233836 1548 ntBASIC6.15□□□□□ -1.43
ATG4DQ86TL0 AL136531.3-201ENST00000624378 3658 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 UGT2B27P-201ENST00000505092 1620 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC079298.1-201ENST00000625026 1619 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC103591.2-201ENST00000265259 766 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC007066.1-201ENST00000392902 381 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 RNA5SP80-201ENST00000410475 111 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AL356968.2-201ENST00000412769 1257 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 HMGB3P23-201ENST00000414981 585 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 GAPDHP57-201ENST00000424400 585 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ETF1P3-201ENST00000430422 1160 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 PUDPP2-201ENST00000431423 643 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ARMC4P1-201ENST00000438905 707 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AL512286.1-201ENST00000439244 400 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AL591363.1-201ENST00000450091 483 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 VDAC2P4-201ENST00000452925 711 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 OR52A4P-201ENST00000472867 958 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AP002884.1-201ENST00000479691 655 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 CCDC11P1-201ENST00000503137 1162 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ATP1B1P1-201ENST00000509767 915 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC091133.4-201ENST00000511142 308 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 MRPS5P3-201ENST00000515577 166 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 RN7SKP98-201ENST00000517070 156 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC131935.1-201ENST00000524621 333 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 CR383656.6-201ENST00000550518 394 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 DPPA3P2-201ENST00000553589 478 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AL590032.1-201ENST00000604920 252 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC106900.2-201ENST00000604994 317 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC073348.1-201ENST00000623002 331 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 MIR6863-201ENST00000636112 90 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ATE1-AS1-202ENST00000636460 506 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 OR52B5P-202ENST00000641118 1110 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 MFSD8-245ENST00000641743 948 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 SAMMSON-227ENST00000642114 1199 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AL022578.1-201ENST00000439330 1433 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 CYP2G2P-201ENST00000594920 1485 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.14□□□□□ -1.43
ATG4DQ86TL0 OR10AB1P-202ENST00000641219 1686 ntBASIC6.14□□□□□ -1.43
ATG4DQ86TL0 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC009220.2-201ENST00000489759 1751 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AC073342.2-201ENST00000595842 1800 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
ATG4DQ86TL0 OR2M1P-201ENST00000318104 951 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 RNU6-534P-201ENST00000364877 106 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 RNU1-55P-201ENST00000365510 158 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 ARSFP1-201ENST00000398758 477 ntBASIC6.13□□□□□ -1.43
ATG4DQ86TL0 AL356776.1-201ENST00000406574 447 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms