Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC073365.1-203ENST00000641055 1992 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 RNU6-98P-201ENST00000384173 107 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AF228730.1-201ENST00000397972 663 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 RN7SKP199-201ENST00000410325 305 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 RN7SKP97-201ENST00000410966 333 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AL357752.1-201ENST00000412817 349 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 PCNPP4-201ENST00000414817 517 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 YWHAEP5-201ENST00000431545 765 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 ZNF886P-201ENST00000450781 723 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 RNU1-88P-201ENST00000459274 128 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 PSAT1P4-201ENST00000466500 526 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC006539.1-201ENST00000481419 501 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 RPS3AP15-201ENST00000483874 781 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC104687.1-201ENST00000485829 412 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC105233.1-201ENST00000498840 781 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC018442.3-201ENST00000523025 183 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC022884.3-201ENST00000579571 248 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC008521.2-201ENST00000591021 259 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 ZNF92P3-201ENST00000596594 954 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC079395.3-201ENST00000615161 484 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC123767.1-202ENST00000620407 817 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AP003497.2-201ENST00000624220 967 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AL121594.5-201ENST00000631724 573 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AC099786.3-201ENST00000565735 1410 ntBASIC5.55□□□□□ -1.52
RNF44Q7L0R7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF44Q7L0R7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 ANKRD36P1-201ENST00000344424 659 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 SNORA62.2-201ENST00000364672 152 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 RN7SKP78-201ENST00000364711 318 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 OR2W4P-201ENST00000406496 926 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 BTF3P8-201ENST00000414577 526 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 RPS7P9-201ENST00000414704 586 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 HIGD1AP15-201ENST00000416198 280 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AL035551.1-201ENST00000446931 348 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 RNU7-140P-201ENST00000459546 60 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 RPL7P40-201ENST00000481703 745 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC105384.2-201ENST00000508433 640 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC074087.1-201ENST00000512059 724 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 PRELID3BP4-201ENST00000515476 571 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 snoU109.5-201ENST00000516231 132 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC139103.1-201ENST00000534696 1030 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 AL163952.1-202ENST00000569625 600 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF44Q7L0R7 RN7SL544P-201ENST00000617232 284 ntBASIC5.54□□□□□ -1.52
RNF44Q7L0R7 RN7SL763P-201ENST00000620922 284 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms