Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 NDUFB4P12-201ENST00000513465 390 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 RNA5SP249-201ENST00000516127 99 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC012400.1-201ENST00000518452 381 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 HNRNPRP2-201ENST00000528421 743 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC116553.2-201ENST00000564203 463 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC079315.1-201ENST00000602952 623 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC000068.2-201ENST00000608816 460 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AP002967.1-201ENST00000624203 539 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC135068.12-201ENST00000637370 931 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC092111.2-201ENST00000611627 1414 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC023490.2-201ENST00000359859 470 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 RNA5SP319-201ENST00000362768 119 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 RNA5SP132-201ENST00000364725 118 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 OR6E1P-201ENST00000414424 923 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC005008.1-201ENST00000456151 612 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 SCARNA10-201ENST00000459255 330 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC010469.1-201ENST00000463864 576 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 RN7SL51P-201ENST00000468230 285 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 RPS26P39-201ENST00000469206 341 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 STMN1P2-201ENST00000508435 439 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 MTCYBP19-201ENST00000517463 1124 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC067773.1-201ENST00000603284 1094 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC093535.2-201ENST00000624769 2326 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC012020.1-201ENST00000624541 1728 ntBASIC4.52□□□□□ -1.69
CCDC58Q4VC31 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC58Q4VC31 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC108751.5-201ENST00000492880 1336 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 CR383656.5-201ENST00000547616 1340 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 RN7SKP113-201ENST00000363891 295 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 RNA5SP433-201ENST00000364491 114 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 OR4K12P-201ENST00000406538 961 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 PTP4A1P1-201ENST00000420539 515 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AL034379.1-201ENST00000423216 253 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 CLNS1AP1-201ENST00000435954 682 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC002504.1-201ENST00000438281 691 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC108751.2-201ENST00000469993 231 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC020890.1-201ENST00000491837 504 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 RN7SKP183-201ENST00000517169 324 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 RNA5SP373-201ENST00000517271 95 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AL049830.4-201ENST00000555149 351 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms